RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GPR19Q15760 415 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA1324Q6UXG2 1013 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TSPEARQ8WU66 669 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 MYDGFQ969H8 173 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 MARC2Q969Z3 335 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 KLHL5Q96PQ7 755 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NPY6RQ99463 290 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 DPCDQ9BVM2 203 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 WDCPQ9H6R7 721 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TREX1Q9NSU2 369 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CD274Q9NZQ7 290 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SCN1AP35498 2009 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SLC22A5O76082 557 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 S1PR4O95977 384 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GPC1P35052 558 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 PRIM2P49643 509 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 VLDLRP98155 873 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GRIK4Q16099 956 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SPATS1Q496A3 300 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SYTL3Q4VX76 610 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF549Q6P9A3 640 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GPRIN3Q6ZVF9 776 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 RASAL3Q86YV0 1011 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 WDR36Q8NI36 951 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 KATNAL1Q9BW62 490 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 BARHL1Q9BZE3 327 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ZIM2Q9NZV7 527 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NDRG4Q9ULP0 352 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NPM3O75607 178 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CFL1P23528 166 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 HSD3B2P26439 372 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 POU1F1P28069 291 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RPS5P46782 204 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF284Q2VY69 593 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TYW3Q6IPR3 259 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 DENND1CQ8IV53 801 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RAB42Q8N4Z0 105 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 FAM151AQ8WW52 585 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MTFMTQ96DP5 389 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM80Q96HE8 168 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SPATA33Q96N06 139 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF599Q96NL3 588 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 OR52E6Q96RD3 313 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 NT5MQ9NPB1 228 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 IMPAD1Q9NX62 359 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MAP3K20Q9NYL2 800 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 KLK14Q9P0G3 267 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SPASTQ9UBP0 616 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 EIF3KQ9UBQ5 218 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SLC6A14Q9UN76 642 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 NCAM2O15394 837 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TLR5O60602 858 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 VPS4BO75351 444 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SCELO95171 688 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 USP17L7P0C7H9 530 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CD72P21854 359 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CSTF2P33240 577 aaKnown RBP eCLIP7.25□□□□□ -1.251e-7■■■□□ 18.6
CPSF6-202ENST00000435070 EIF2B5Q13144 721 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CLVS2Q5SYC1 327 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TAF8Q7Z7C8 310 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF605Q86T29 641 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 LILRB1Q8NHL6 650 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ULK4Q96C45 1275 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 DPY30Q9C005 99 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 NXF2Q9GZY0 626 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 FZD8Q9H461 694 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 REEP1Q9H902 201 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 GOLGA2P5Q9HBQ8 144 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZMAT5Q9UDW3 170 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RIMKLBQ9ULI2 386 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TNFSF13BQ9Y275 285 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 LOC102723532A0A0G2JNH3 316 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 WASHC1A8K0Z3 465 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SLC9A3R1O14745 358 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 AP2A2O94973 939 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 WSCD2Q2TBF2 565 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 LIPIQ6XZB0 460 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CREB3L2Q70SY1 520 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SLC37A3Q8NCC5 494 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 POF1BQ8WVV4 589 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 BTN2A2Q8WVV5 523 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 FCGR1BQ92637 280 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MRGPRX2Q96LB1 330 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ATOH8Q96SQ7 321 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SRRQ9GZT4 340 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MS4A7Q9GZW8 240 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 B3GNT2Q9NY97 397 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CPNE7Q9UBL6 633 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ATPIF1Q9UII2 106 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 A3GALT2U3KPV4 340 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SIPA1L1O43166 1804 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RGPD3A6NKT7 1758 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RGPD4Q7Z3J3 1758 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 OR5K3A6NET4 321 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SEC22BO75396 215 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 LRATO95237 230 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms