RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 DSG2Q14126 1118 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 SIX1Q15475 284 aaPredicted RBP12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 TPSAB1Q15661 275 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 CTSL3PQ5NE16 218 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 CNSTQ6PJW8 725 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 SHISA6Q6ZSJ9 500 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 PRUNE1Q86TP1 453 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 OR4N4Q8N0Y3 316 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 OTUD6BQ8N6M0 293 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 FBXO15Q8NCQ5 510 aaPredicted RBP12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 HAS2Q92819 552 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 CNDP1Q96KN2 507 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 C10orf90Q96M02 699 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 MRPS30Q9NP92 439 aaKnown RBP12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 MKKSQ9NPJ1 570 aaPredicted RBP12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 RIC8BQ9NVN3 520 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 KLHL42Q9P2K6 505 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 CELSR2Q9HCU4 2923 aa12.91□□□□□ -0.34
GCSHP3-201ENST00000431120 TRAV17A0A0B4J275 112 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 GOLGA6L6A8MZA4 724 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 H0YGG7 62 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 LRRTM2O43300 516 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 ALOX12BO75342 701 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 BMP10O95393 424 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CYC1P08574 325 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 STSP08842 583 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 MYBL2P10244 700 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 COX6A1P12074 109 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 ICAM2P13598 275 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 PAMP19021 973 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CHRM3P20309 590 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 FMO4P31512 558 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 SOX11P35716 441 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 EMP2P54851 167 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 ARF3P61204 181 aaPredicted RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 ARG2P78540 354 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CRADDP78560 199 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 PRDX1Q06830 199 aaKnown RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 FAM53BQ14153 422 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 TTLL9Q3SXZ7 439 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 LINC00696Q6ZRV3 163 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 GSTA5Q7RTV2 222 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 METTL27Q8N6F8 245 aaPredicted RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 RERGQ96A58 199 aaPredicted RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 MFSD3Q96ES6 412 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CABS1Q96KC9 395 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 EBNA1BP2Q99848 306 aaKnown RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 RNF32Q9H0A6 362 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 OLAHQ9NV23 265 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 INTS10Q9NVR2 710 aaKnown RBP12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 OSGIN2Q9Y236 505 aa12.9□□□□□ -0.34
GCSHP3-201ENST00000431120 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.35
GCSHP3-201ENST00000431120 LOC102723996A0A087X1L8 192 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 MAGEB16A2A368 324 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ARHGEF33A8MVX0 844 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 IDSB3KWA1 339 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 E5RI56 91 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 NIPSNAP2O75323 286 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 KLHL18O94889 574 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 MED26O95402 600 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ANXA5P08758 320 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 PRR35P0CG20 571 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 EZRP15311 586 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 MGAT1P26572 445 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 COL8A1P27658 744 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 SLC26A3P40879 764 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 FASTKQ14296 549 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ZRSR2Q15696 482 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 VWA2Q5GFL6 755 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ZNF425Q6IV72 752 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ZNF662Q6ZS27 426 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 PAQR7Q86WK9 346 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 CSNK1A1LQ8N752 337 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 OR1N1Q8NGS0 311 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 PSMF1Q92530 271 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 OR2A5Q96R48 311 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ACAT2Q9BWD1 397 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 ENTPD4Q9Y227 616 aa12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 MRPS2Q9Y399 296 aaKnown RBP12.89□□□□□ -0.35
GCSHP3-201ENST00000431120 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
GCSHP3-201ENST00000431120 IGHV1-45A0A0A0MS14 117 aa12.88□□□□□ -0.35
GCSHP3-201ENST00000431120 HNRNPRO43390 633 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms