RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 TRAM1L1Q8N609 369 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 CHDHQ8NE62 594 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-211ENST00000429899 MR1Q95460 341 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 SH3KBP1Q96B97 665 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 APOPT1Q96IL0 206 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 TCF12Q99081 682 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 P2RY12Q9H244 342 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 EPB41L1Q9H4G0 881 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 SNX15Q9NRS6 342 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-211ENST00000429899 CPNE7Q9UBL6 633 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 CD84Q9UIB8 345 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 TCFL5Q9UL49 500 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 MED16Q9Y2X0 877 aa9.73□□□□□ -0.85
ATG4B-211ENST00000429899 MTO1Q9Y2Z2 717 aaKnown RBP9.73□□□□□ -0.85
ATG4B-211ENST00000429899 INTS1Q8N201 2190 aaKnown RBP9.73□□□□□ -0.85
ATG4B-211ENST00000429899 TRGV8A0A0C4DH27 118 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 LILRA5A6NI73 299 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 FADS2P1A8MWK0 482 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 CCL21O00585 134 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 PRPF4O43172 522 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■□□□ 14
ATG4B-211ENST00000429899 SNX2O60749 519 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 UBXN7O94888 489 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ALPPP05187 535 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 FDXRP22570 491 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 RPS3P23396 243 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 PPP1CAP62136 330 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 UBE2IP63279 158 aaKnown RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 TIAL1Q01085 375 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 DPTQ07507 201 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 LRP8Q14114 963 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ITIH4Q14624 930 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ATP13A5Q4VNC0 1218 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 CTSL3PQ5NE16 218 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 DCAF10Q5QP82 559 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 LGSNQ5TDP6 509 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 CHST15Q7LFX5 561 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 PRSS42Q7Z5A4 293 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 SLC9B2Q86UD5 537 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 SERPINA9Q86WD7 417 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 BANPQ8N9N5 519 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ACMSDQ8TDX5 336 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 RSC1A1Q92681 617 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 SCAMP4Q969E2 229 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ULK4Q96C45 1275 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 BIRC8Q96P09 236 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 VPS35Q96QK1 796 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 NDNQ99608 321 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 OLFM1Q99784 485 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 SLX1AQ9BQ83 275 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 AARSD1Q9BTE6 412 aaKnown RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 RIOK2Q9BVS4 552 aaKnown RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ABCG8Q9H221 673 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 FAM83DQ9H4H8 585 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 FAM96AQ9H5X1 160 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 STN1Q9H668 368 aaKnown RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 ASB8Q9H765 288 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 CAB39LQ9H9S4 337 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 PDE7BQ9NP56 450 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 SH3BGRL2Q9UJC5 107 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 RARRES3Q9UL19 164 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 KCNK6Q9Y257 313 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
ATG4B-211ENST00000429899 RPH3AQ9Y2J0 694 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-211ENST00000429899 CPAMD8Q8IZJ3 1885 aa9.71□□□□□ -0.85
ATG4B-211ENST00000429899 IGHV5-51A0A0C4DH38 117 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 TMEM120BA0PK00 339 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 OR1I1O60431 355 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 DNAJC6O75061 913 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 JRKO75564 520 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 CAPN1P07384 714 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 EBLN1P0CF75 366 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 SLC35E2BP0CK96 405 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 PYGBP11216 843 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 F3P13726 295 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 BRAFP15056 766 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 KRT4P19013 534 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 UGT1A6P19224 532 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 UGT1A1P22309 533 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 UGT1A4P22310 534 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 HPDP32754 393 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-211ENST00000429899 IST1P53990 364 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 SLC18A1P54219 525 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 CDKN2DP55273 166 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 TAS2R39P59534 338 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 POU4F1Q01851 419 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 MPP2Q14168 576 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 MYBPC3Q14896 1274 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 HECTD2Q5U5R9 776 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 TMEM198Q66K66 360 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 FAM45BPQ6NSW5 357 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 RPTNQ6XPR3 784 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 SDCCAG8Q86SQ7 713 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-211ENST00000429899 GALNT13Q8IUC8 556 aa9.71□□□□□ -0.86
ATG4B-211ENST00000429899 GPATCH11Q8N954 259 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms