RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ACAT2Q9BWD1 397 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 TRIM8Q9BZR9 551 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 C14orf105Q9NVL8 296 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 RIMKLBQ9ULI2 386 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 R3HDM2Q9Y2K5 976 aaKnown RBP17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 HEATR5BQ9P2D3 2071 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 A0A1W2PQ72 361 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR2A25A4D2G3 310 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 RCCD1A6NED2 376 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 H0YGG7 62 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRAMEF2O60811 474 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 MYBL2P10244 700 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 ADRA1DP25100 572 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 CMPK1P30085 196 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 ARF3P61204 181 aaPredicted RBP17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 YBX1P67809 324 aaKnown RBP17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 PMP22Q01453 160 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 ACVR1Q04771 509 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 NAA25Q14CX7 972 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 ABHD17BQ5VST6 288 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 HMGCLL1Q8TB92 370 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 MMABQ96EY8 250 aaPredicted RBP17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 MRFAP1L1Q96HT8 127 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 CALR3Q96L12 384 aaKnown RBP17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 FOPNLQ96NB1 174 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 DPH7Q9BTV6 452 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 RNF32Q9H0A6 362 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 CATSPERZQ9NTU4 200 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 TSR3Q9UJK0 312 aaKnown RBP17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 MRFAP1Q9Y605 127 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 DUSP10Q9Y6W6 482 aa17.4■□□□□ 0.38
UPK3BP1-201ENST00000428678 SCN2AQ99250 2005 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 A0A1W2PPV9 198 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 OR5H15A6NDH6 313 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 ERI2A8K979 691 aaKnown RBP17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 SLC19A2O60779 497 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 VPS26AO75436 327 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 KRT38O76015 456 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 ANXA5P08758 320 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 CCNFP41002 786 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 GRIA1P42261 906 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 AP2B1P63010 937 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 ZNF33BQ06732 778 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 FBXO42Q6P3S6 717 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 XKRXQ6PP77 449 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 NEK10Q6ZWH5 1172 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 OTOAQ7RTW8 1153 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 CSNK1A1LQ8N752 337 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 MVB12AQ96EY5 273 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 PANX3Q96QZ0 392 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 ZNF700Q9H0M5 742 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 GNPTGQ9UJJ9 305 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 TCAF1Q9Y4C2 921 aa17.39■□□□□ 0.37
UPK3BP1-201ENST00000428678 NCOA6Q14686 2063 aaPredicted RBP17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 E7EVH7 732 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 ESRRAP11474 423 aaPredicted RBP17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 ICAM2P13598 275 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 TTPAP49638 278 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 FASTKQ14296 549 aaKnown RBP17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 PCOLCEQ15113 449 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 LONRF1Q17RB8 773 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 HKDC1Q2TB90 917 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 AMER2Q8N7J2 671 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 AMER3Q8N944 861 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 SLC35B2Q8TB61 432 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 ETNK1Q9HBU6 452 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 MKKSQ9NPJ1 570 aaPredicted RBP17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 STMN3Q9NZ72 180 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 SPATA7Q9P0W8 599 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 TEKT2Q9UIF3 430 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 MKL2Q9ULH7 1088 aa17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 RUVBL1Q9Y265 456 aaKnown RBP17.38■□□□□ 0.37
UPK3BP1-201ENST00000428678 LOC102723996A0A087X1L8 192 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 KPNA5O15131 536 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 SUN1O94901 812 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 SLC26A3P40879 764 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 SMSP52788 366 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 EMP3P54852 163 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 ADORA2A-AS1P86434 159 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 KLF1Q13351 362 aaPredicted RBP17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 TSTA3Q13630 321 aaPredicted RBP17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 C3AR1Q16581 482 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 ZNF295-AS1Q8N0V1 137 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 UBL4BQ8N7F7 174 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 LRRC57Q8N9N7 239 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 PPHLN1Q8NEY8 458 aaKnown RBP17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 MAGEC3Q8TD91 643 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 MAGED4Q96JG8 741 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 PLCD4Q9BRC7 762 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 TGIF2Q9GZN2 237 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 P2RY12Q9H244 342 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 MRPS30Q9NP92 439 aaKnown RBP17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 IGSF5Q9NSI5 407 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 TINAGQ9UJW2 476 aa17.37■□□□□ 0.37
UPK3BP1-201ENST00000428678 SPG11Q96JI7 2443 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 A0A0A6YYC8 382 aaPredicted RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 A0A0U1RQJ8 604 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms