RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TAF1BQ53T94 588 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 GRTP1Q5TC63 336 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 FCRL6Q6DN72 434 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TCTN3Q6NUS6 607 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TRMT10BQ6PF06 316 aaKnown RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PAQR3Q6TCH7 311 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 FAM198BQ6UWH4 519 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 LCTLQ6UWM7 567 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 UBE2R2Q712K3 238 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PAQR7Q86WK9 346 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TCAIMQ8N3R3 496 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ZNF655Q8N720 491 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CEP112Q8N8E3 955 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 SLC38A9Q8NBW4 561 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 OR56A3Q8NH54 315 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CFAP61Q8NHU2 1237 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 FBXO25Q8TCJ0 367 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CT55Q8WUE5 264 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 FBXL8Q96CD0 374 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 UBXN10Q96LJ8 280 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PKP4Q99569 1192 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 SLC30A3Q99726 388 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 NDC1Q9BTX1 674 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 DERL2Q9GZP9 239 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 MLXIPLQ9NP71 852 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 MRPS30Q9NP92 439 aaKnown RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CCDC177Q9NQR7 707 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TXNDC16Q9P2K2 825 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 COPG2Q9UBF2 871 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 MTRF1LQ9UGC7 380 aaKnown RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TCFL5Q9UL49 500 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PDE10AQ9Y233 779 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 FER1L5A0AVI2 2057 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ZNF462Q96JM2 2506 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CTAGE15A4D2H0 777 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 SYNDIG1LA6NDD5 238 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 PABPN1LA6NDY0 278 aaKnown RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 EIF4E1BA6NMX2 242 aaKnown RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 KLF7O75840 302 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CEACAM4O75871 244 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CTAGE8P0CG41 777 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 WT1P19544 449 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 IL10P22301 178 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 RPA3P35244 121 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 GGT5P36269 586 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CSRP3P50461 194 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CDKN2DP55273 166 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 SKP1P63208 163 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CUL1Q13616 776 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 E2F2Q14209 437 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 PPP1R3AQ16821 1122 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 NKAIN1Q4KMZ8 207 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CAPN13Q6MZZ7 669 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 FBXO38Q6PIJ6 1188 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 ZDHHC24Q6UX98 284 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 NAPRTQ6XQN6 538 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 C3orf62Q6ZUJ4 267 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CTAGE6Q86UF2 777 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 VASH2Q86V25 355 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 RAB43Q86YS6 212 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CTAGE4Q8IX94 777 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CPNE9Q8IYJ1 553 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 ARHGEF39Q8N4T4 335 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 OR4K1Q8NGD4 311 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 OR2Y1Q8NGV0 311 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 EEF1AKMT1Q8WVE0 214 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 JPH3Q8WXH2 748 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CLIP3Q96DZ5 547 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 CRELD1Q96HD1 420 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 C16orf45Q96MC5 204 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 PPM1MQ96MI6 270 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 BBC3Q96PG8 261 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 OR2A5Q96R48 311 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 RBBP8Q99708 897 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 SELENOSQ9BQE4 189 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 SLC7A5P2Q9GIP4 190 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 TGIF2Q9GZN2 237 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 SLC25A18Q9H1K4 315 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 ACTL8Q9H568 366 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 PPANQ9NQ55 473 aaKnown RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 ZDHHC18Q9NUE0 388 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 STOX2Q9P2F5 926 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-203ENST00000428014 GALPQ9UBC7 116 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 IL17BQ9UHF5 180 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 KCNMB2Q9Y691 235 aa8.75□□□□□ -1.01
SMC1A-203ENST00000428014 IGKV1-8A0A0C4DH67 115 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 FAM95CA0A1B0GW59 222 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 VSTM2BA6NLU5 285 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 B8ZZF3 427 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 H0YIG0 161 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 CTSVO60911 334 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 URI1O94763 535 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-203ENST00000428014 NTRK1P04629 796 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 ANXA5P08758 320 aa8.74□□□□□ -1.01
SMC1A-203ENST00000428014 PVRP15151 417 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms