RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CUEDC1Q9NWM3 386 aaPredicted RBP21.39■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FARSAQ9Y285 508 aaKnown RBP21.39■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ATRXP46100 2492 aa21.39■■□□□ 1.01
PTCHD3P2-201ENST00000424937 C9J4A7 227 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FAM155BO75949 473 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GUCA1CO95843 209 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ENO2P09104 434 aaPredicted RBP21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 AP1S2P56377 157 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NAB1Q13506 487 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NAE1Q13564 534 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 LY6DQ14210 128 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 LINC00303Q3SY05 128 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CRTC2Q53ET0 693 aaPredicted RBP21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 BORAQ6PGQ7 559 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SBSNQ6UWP8 590 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PAQR7Q86WK9 346 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 TTC29Q8NA56 475 aaPredicted RBP21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 LSM14AQ8ND56 463 aaKnown RBP21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ANKRD49Q8WVL7 239 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 WBP1Q96G27 269 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GBP5Q96PP8 586 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 UTP6Q9NYH9 597 aaKnown RBP21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NINJ2Q9NZG7 142 aa21.38■■□□□ 1.01
PTCHD3P2-201ENST00000424937 LOC105369274A0A096LPK9 316 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 LOC102723532A0A0G2JNH3 316 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CDC14CA4D256 554 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CDC7O00311 574 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PHGDHO43175 533 aaKnown RBP21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 RAB40ALP0C0E4 278 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 STMN1P16949 149 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SPRP35270 261 aaPredicted RBP21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ARSFP54793 590 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GRM7Q14831 915 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SLC9A5Q14940 896 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SLMAPQ14BN4 828 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NCF4Q15080 339 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 DEFB109BQ30KR1 87 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 WASHC2DQ5SRD0 308 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GRTP1Q5TC63 336 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ZNF425Q6IV72 752 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 TTLL10Q6ZVT0 673 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SYVN1Q86TM6 617 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 OR4N4Q8N0Y3 316 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ZNF285Q96NJ3 590 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NLNQ9BYT8 704 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 UNKQ9C0B0 810 aaKnown RBP21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CUTCQ9NTM9 273 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NDOR1Q9UHB4 597 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SNX7Q9UNH6 387 aa21.37■■□□□ 1.01
PTCHD3P2-201ENST00000424937 HAT1O14929 419 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SRPX2O60687 465 aaPredicted RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 EIF2S1P05198 315 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CAPN1P07384 714 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FURINP09958 794 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 EZRP15311 586 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ALAS2P22557 587 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CCND1P24385 295 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ECHS1P30084 290 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PHBP35232 272 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GCGRP47871 477 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 DCDP81605 110 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NFKB2Q00653 900 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 IL10RAQ13651 578 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PPP1R3AQ16821 1122 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 UBAP2Q5T6F2 1119 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FRA10AC1Q70Z53 315 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SGPP1Q9BX95 441 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PCBD2Q9H0N5 130 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 TSPYL1Q9H0U9 437 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CDC42EP4Q9H3Q1 356 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 IFT80Q9P2H3 777 aaPredicted RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CTNNAL1Q9UBT7 734 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NOVA2Q9UNW9 492 aaKnown RBP21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SH2B3Q9UQQ2 575 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PIEZO2Q9H5I5 2752 aa21.36■■□□□ 1.01
PTCHD3P2-201ENST00000424937 A0A1B0GX78 115 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FITM1A5D6W6 292 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 H0YGG7 62 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PRB1P04280 392 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FAM87AP0C7U9 286 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ARF3P61204 181 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 TSNQ15631 228 aaKnown RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NKAIN1Q4KMZ8 207 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FAM69BQ5VUD6 431 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 YOD1Q5VVQ6 348 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 CAPN13Q6MZZ7 669 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FBXO42Q6P3S6 717 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ADAMTSL2Q86TH1 951 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 C17orf64Q86WR6 236 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 SPATA6LQ8N4H0 392 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ATL1Q8WXF7 558 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 ANKRD7Q92527 254 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 PYCR2Q96C36 320 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 FBXL8Q96CD0 374 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 MRRFQ96E11 262 aaKnown RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 C17orf62Q9BQA9 187 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 GPN3Q9UHW5 284 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 TCFL5Q9UL49 500 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 POLHQ9Y253 713 aa21.35■■□□□ 1.01
PTCHD3P2-201ENST00000424937 NUP210LQ5VU65 1888 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms