RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SUSD4Q5VX71 490 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 BSPRYQ5W0U4 402 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 OR4A47Q6IF82 309 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 SLC30A6Q6NXT4 461 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 TLK2Q86UE8 772 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 MAML2Q8IZL2 1156 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 C11orf45Q8TAV5 145 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ZNRF4Q8WWF5 429 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ROBO4Q8WZ75 1007 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ARHGAP45Q92619 1136 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 SPSB1Q96BD6 273 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 NSMCE3Q96MG7 304 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ZNF558Q96NG5 402 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 MAP3K3Q99759 626 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 RBM4BQ9BQ04 359 aaKnown RBP3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ZMYND12Q9H0C1 365 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 TMX4Q9H1E5 349 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 FZD8Q9H461 694 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 SPHK2Q9NRA0 654 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 NKIRAS2Q9NYR9 191 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 TP53BP1Q12888 1972 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 HEG1Q9ULI3 1381 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 SYNDIG1LA6NDD5 238 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 ERI2A8K979 691 aaKnown RBP3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 C2CD4DB7Z1M9 353 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 O00370 1275 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 ATP1B1P05026 303 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 FYNP06241 537 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 SAGP10523 405 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRT5P13647 590 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRT20P35900 424 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 RAB28P51157 221 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 DNA2P51530 1060 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 ALDH3A2P51648 485 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 LMO4P61968 165 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 FASTKD1Q53R41 847 aaKnown RBP3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRBOX4Q5JUW0 171 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRT39Q6A163 491 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 GTSCR1Q86UQ5 136 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 RASGEF1AQ8N9B8 481 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KCNE4Q8WWG9 221 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 SLCO2A1Q92959 643 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 HDAC11Q96DB2 347 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 SPATA33Q96N06 139 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRT12Q99456 494 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 PI4K2AQ9BTU6 479 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 PRRG4Q9BZD6 226 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 CHST11Q9NPF2 352 aa3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 PPANQ9NQ55 473 aaKnown RBP3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 BCCIPQ9P287 314 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P49-201ENST00000418882 A0A087WUV0 522 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 A8MXE2 369 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 E9PQ18 207 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 TEX28O15482 410 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 HNF4AP41235 474 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 GSCP56915 257 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 TRAP1Q12931 704 aaKnown RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 PRPF4BQ13523 1007 aaKnown RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 NONOQ15233 471 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 LACTB2Q53H82 288 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 OR4C11Q6IEV9 310 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 STXBP4Q6ZWJ1 553 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 OR8H2Q8N162 312 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 PRSS33Q8NF86 280 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 OR7A2PQ8NGA2 310 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 MRPS27Q92552 414 aaKnown RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 PIK3R3Q92569 461 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 PROX1Q92786 737 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 ANKRD9Q96BM1 317 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 OMA1Q96E52 524 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 CFAP57Q96MR6 1250 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 SPAG5Q96R06 1193 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 USP28Q96RU2 1077 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 LPAR4Q99677 370 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 PITPNM3Q9BZ71 974 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 TBC1D7Q9P0N9 293 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 CHKBQ9Y259 395 aa3.74□□□□□ -1.81
HMGB1P49-201ENST00000418882 TRAV24A0A0B4J272 114 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 MTMR11A4FU01 709 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 GLTPD2A6NH11 291 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 MPTX1A8MV57 137 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 PI4K2BG5E9Z4 385 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 SOCS3O14543 225 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 FIBPO43427 364 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 GGPS1O95749 300 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 TCF4P15884 667 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 SP100P23497 879 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 SOX3P41225 446 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 CALD1Q05682 793 aaKnown RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 MZT1Q08AG7 82 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 CALCOCO2Q13137 446 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 NFATC2Q13469 925 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 CAMK2DQ13557 499 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 TRA2AQ13595 282 aaKnown RBP eCLIP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms