RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ENTPD5O75356 428 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 SLC16A8O95907 504 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PRR35P0CG20 571 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 G6PDP11413 515 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 HSD17B1P14061 328 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 MAT2AP31153 395 aaKnown RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 GCKP35557 465 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 GRB7Q14451 532 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TRIP10Q15642 601 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 WDR45BQ5MNZ6 344 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 WASH2PQ6VEQ5 465 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 RD3Q7Z3Z2 195 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 UBALD2Q8IYN6 164 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 C7orf57Q8NEG2 295 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 LZICQ8WZA0 190 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 RGMAQ96B86 450 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TESCQ96BS2 214 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PYCR2Q96C36 320 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PPCDCQ96CD2 204 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 KLHDC7BQ96G42 594 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 WASH6PQ9NQA3 447 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 BATF3Q9NR55 127 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 THUMPD1Q9NXG2 353 aaKnown RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 ANKMY1Q9P2S6 941 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ZNF282Q9UDV7 671 aaPredicted RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 RPS6KA6Q9UK32 745 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 KIR2DS5A0A0G2JLQ3 304 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 A0A0G2JNG1 304 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 KIR2DS3K7RE56 304 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PLK4O00444 970 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 DRD3P35462 400 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 KIR2DS5Q14953 304 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 USP39Q53GS9 565 aaKnown RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 NOXRED1Q6NXP6 359 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 NUDT13Q86X67 352 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 GKN2Q86XP6 184 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ADCY4Q8NFM4 1077 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 BDH2Q9BUT1 245 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 SRMSQ9H3Y6 488 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ZSCAN32Q9NX65 697 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ANAPC2Q9UJX6 822 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 A0A096LPI6 279 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ISM1B1AKI9 464 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 CHURC1-FNTBB4DL54 471 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TXNDC9O14530 226 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 IMPA1P29218 277 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 CD6P30203 668 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ACTR1BP42025 376 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ARFIP1P53367 373 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 FOXA1P55317 472 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ACTR1AP61163 376 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TRA2BP62995 288 aaKnown RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 GNA13Q14344 377 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 CYP51A1Q16850 503 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 LEXMQ3ZCV2 418 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 WLSQ5T9L3 541 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PTCRAQ6ISU1 281 aaPredicted RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 PGM2L1Q6PCE3 622 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 SYT13Q7L8C5 426 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 HPS6Q86YV9 775 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 TP53I13Q8NBR0 393 aaPredicted RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 OR2L8Q8NGY9 312 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ZNF480Q8WV37 535 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 CGREF1Q99674 301 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 ALG2Q9H553 416 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 LMAN1LQ9HAT1 526 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 OR6C2Q9NZP2 312 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 CNOT6Q9ULM6 557 aaKnown RBP8.12□□□□□ -1.11
USP54-203ENST00000418501 DTNAQ9Y4J8 743 aa8.12□□□□□ -1.11
USP54-203ENST00000418501 PRSS38A1L453 326 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PCDH7O60245 1069 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SERPIND1P05546 499 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PGRP06401 933 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 NTSP30990 170 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 IFNA8P32881 189 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 CPOXP36551 454 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 C21orf59P57076 290 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SPDYE7PQ495Y7 208 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 IRAK1BP1Q5VVH5 260 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 TRIM40Q6P9F5 258 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SDR16C5Q8N3Y7 309 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 CAMKK1Q8N5S9 505 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 EME1Q96AY2 570 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 CAMK1GQ96NX5 476 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 OR52A5Q9H2C5 316 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SH3BP4Q9P0V3 963 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 ACTR3BQ9P1U1 418 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 WNT16Q9UBV4 365 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 ADAM29Q9UKF5 820 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 IKZF3Q9UKT9 509 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 C15orf41Q9Y2V0 281 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 OBSL1O75147 1896 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 OTOL1A6NHN0 477 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 AKAP10O43572 662 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms