RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SPTBN1Q01082 2364 aaKnown RBP24.18■■□□□ 1.46
VEGFA-208ENST00000417285 SOCS6O14544 535 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 MPC1LP0DKB6 136 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 PGAM1P18669 254 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 ITGA3P26006 1051 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 PNLIPRP1P54315 467 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 ABATP80404 500 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 IRAK1BP1Q5VVH5 260 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 KIRREL2Q6UWL6 708 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 KCNMB4Q86W47 210 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 LRRC4CQ9HCJ2 640 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 SLC6A20Q9NP91 592 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 LUZP4Q9P127 313 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 CTSFQ9UBX1 484 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 ZNF282Q9UDV7 671 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-208ENST00000417285 FBXO5Q9UKT4 447 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 HS3ST3B1Q9Y662 390 aa24.18■■□□□ 1.46
VEGFA-208ENST00000417285 PCSK5Q92824 1860 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 CCDC88CQ9P219 2028 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 CYSRT1A8MQ03 144 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 H0YGG7 62 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 GFYI3L273 518 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 ZBTB14O43829 449 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 F7P08709 466 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-208ENST00000417285 ARF3P61204 181 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-208ENST00000417285 RBBP7Q16576 425 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 PRTGQ2VWP7 1150 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 HSP90AA5PQ58FG0 334 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 ZNF549Q6P9A3 640 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 SUSD1Q6UWL2 747 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 SLC30A3Q99726 388 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 SOX17Q9H6I2 414 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-208ENST00000417285 MAP10Q9P2G4 905 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 MAU2Q9Y6X3 613 aa24.17■■□□□ 1.46
VEGFA-208ENST00000417285 TXNDC9O14530 226 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 AGFG2O95081 481 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 TTC4O95801 387 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 SLC16A8O95907 504 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 YBX1P67809 324 aaKnown RBP24.16■■□□□ 1.46
VEGFA-208ENST00000417285 CRYMQ14894 314 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 TUBB8Q3ZCM7 444 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 AGAP7PQ5VUJ5 663 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 ICE2Q659A1 982 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 PAQR7Q86WK9 346 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 TMEM151BQ8IW70 566 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 GIMAP7Q8NHV1 300 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 STT3BQ8TCJ2 826 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 MIEF2Q96C03 454 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 MVB12AQ96EY5 273 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 RUNDC3BQ96NL0 473 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 AGAP4Q96P64 663 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 EBNA1BP2Q99848 306 aaKnown RBP24.16■■□□□ 1.46
VEGFA-208ENST00000417285 NAT9Q9BTE0 207 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 ILKAPQ9H0C8 392 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-208ENST00000417285 IARS2Q9NSE4 1012 aaKnown RBP24.16■■□□□ 1.46
VEGFA-208ENST00000417285 MED16Q9Y2X0 877 aa24.16■■□□□ 1.46
VEGFA-208ENST00000417285 USP27XA6NNY8 438 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 TCP11X1B4DZS4 312 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 E7ENX8 843 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 EIF3FO00303 357 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 PRPF4O43172 522 aaKnown RBP eCLIP24.15■■□□□ 1.465e-8■■■□□ 16
VEGFA-208ENST00000417285 ZGLP1P0C6A0 271 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 GNG11P61952 73 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 MPP1Q00013 466 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 TAP2Q03519 686 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 DHX9Q08211 1270 aaKnown RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 CUL1Q13616 776 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 TSTA3Q13630 321 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 ESPL1Q14674 2120 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 GARNL3Q5VVW2 1013 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 CYHR1Q6ZMK1 362 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 SYDE1Q6ZW31 735 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 METTL27Q8N6F8 245 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 ZNF480Q8WV37 535 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 RERGQ96A58 199 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 SNRNP40Q96DI7 357 aaKnown RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 CABS1Q96KC9 395 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 GPR21Q99679 349 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 AARSD1Q9BTE6 412 aaKnown RBP24.15■■□□□ 1.46
VEGFA-208ENST00000417285 TAC3Q9UHF0 121 aa24.15■■□□□ 1.46
VEGFA-208ENST00000417285 IGLV3-12A0A075B6K2 115 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 MASP2O00187 686 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 NRP2O60462 931 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 HAUS5O94927 633 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 EZRP15311 586 aaKnown RBP24.14■■□□□ 1.45
VEGFA-208ENST00000417285 SKIV2L2P42285 1042 aaKnown RBP24.14■■□□□ 1.45
VEGFA-208ENST00000417285 KLC1Q07866 573 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 PRR30Q53SZ7 412 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-208ENST00000417285 SPANXN3Q5MJ09 141 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 ZNF425Q6IV72 752 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 LRRC8EQ6NSJ5 796 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 UGT3A1Q6NUS8 523 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 Q6ZS92 163 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 SHISA6Q6ZSJ9 500 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 OR11G2Q8NGC1 345 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 CAPZA3Q96KX2 299 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 OR2A5Q96R48 311 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 CRB3Q9BUF7 120 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 LHPPQ9H008 270 aa24.14■■□□□ 1.45
VEGFA-208ENST00000417285 CUEDC1Q9NWM3 386 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms