RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PTK6Q13882 451 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 NAA25Q14CX7 972 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 PLEKHN1Q494U1 663 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-210ENST00000416778 VWA5B1Q5TIE3 1220 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 ICE2Q659A1 982 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 KIRREL2Q6UWL6 708 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 IGFL3Q6UXB1 125 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 OR2A5Q96R48 311 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 CTSFQ9UBX1 484 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 PTPN13Q12923 2485 aa17.06■□□□□ 0.32
CPNE1-210ENST00000416778 PCM1Q15154 2024 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 USP27XA6NNY8 438 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 CYSRT1A8MQ03 144 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 BANF1O75531 89 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 TTC4O95801 387 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 CRYMQ14894 314 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 INPP5JQ15735 1006 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-210ENST00000416778 SLC6A19Q695T7 634 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 PRMT9Q6P2P2 845 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 SHISA6Q6ZSJ9 500 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 CPNE9Q8IYJ1 553 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 METTL27Q8N6F8 245 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-210ENST00000416778 GALNT11Q8NCW6 608 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 EEF1AKMT1Q8WVE0 214 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 COL26A1Q96A83 441 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 PNPLA2Q96AD5 504 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 C10orf90Q96M02 699 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 FAM167BQ9BTA0 163 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 SOX17Q9H6I2 414 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-210ENST00000416778 PLAC1Q9HBJ0 212 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 TAC3Q9UHF0 121 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 CDC23Q9UJX2 597 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 HS3ST3B1Q9Y662 390 aa17.05■□□□□ 0.32
CPNE1-210ENST00000416778 USP9XQ93008 2570 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 EIF3FO00303 357 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 KLHL41O60662 606 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 VPS26AO75436 327 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 SYF2O95926 243 aaKnown RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 ABATP80404 500 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 AIMP2Q13155 320 aaKnown RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 TSTA3Q13630 321 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 MUM1Q2TAK8 710 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 SPANXN3Q5MJ09 141 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 UBE2R2Q712K3 238 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 PIWIL4Q7Z3Z4 852 aaKnown RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 LAPTM4BQ86VI4 370 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 ARHGEF39Q8N4T4 335 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 STT3BQ8TCJ2 826 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 NAT9Q9BTE0 207 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 ZBTB20Q9HC78 741 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 SEMA3GQ9NS98 782 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 FBXL4Q9UKA2 621 aa17.04■□□□□ 0.32
CPNE1-210ENST00000416778 NXT1Q9UKK6 140 aaKnown RBP17.04■□□□□ 0.32
CPNE1-210ENST00000416778 IGLV3-12A0A075B6K2 115 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 SMAPO00193 183 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 VPS4BO75351 444 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 ZGLP1P0C6A0 271 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 IMPA1P29218 277 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 CARSP49589 748 aaKnown RBP17.03■□□□□ 0.32
CPNE1-210ENST00000416778 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 PRAMEF13Q5VWM6 474 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 ATG9BQ674R7 924 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 UGT3A1Q6NUS8 523 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 PAQR3Q6TCH7 311 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 EFCAB3Q8N7B9 438 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 PWWP2AQ96N64 755 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 NDNQ99608 321 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 SLAMF7Q9NQ25 335 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 UTP6Q9NYH9 597 aaKnown RBP17.03■□□□□ 0.32
CPNE1-210ENST00000416778 LUZP4Q9P127 313 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 ZNF282Q9UDV7 671 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-210ENST00000416778 ADAMTS6Q9UKP5 1117 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 VPS4AQ9UN37 437 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 PDE10AQ9Y233 779 aa17.03■□□□□ 0.32
CPNE1-210ENST00000416778 RUVBL1Q9Y265 456 aaKnown RBP17.03■□□□□ 0.32
CPNE1-210ENST00000416778 H7BY64 318 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CCNDBP1O95273 360 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
CPNE1-210ENST00000416778 GNLYP22749 145 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 SLC26A3P40879 764 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CDKN2DP55273 166 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 OCA2Q04671 838 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 KLC1Q07866 573 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 HKDC1Q2TB90 917 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 BBS9Q3SYG4 887 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 VWA2Q5GFL6 755 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CRB2Q5IJ48 1285 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 GARNL3Q5VVW2 1013 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 KIAA0408Q6ZU52 694 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 SYDE1Q6ZW31 735 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-210ENST00000416778 FAM26EQ8N5C1 309 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CSNK1A1LQ8N752 337 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 OR11G2Q8NGC1 345 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms