RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CTSL3PQ5NE16 218 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ZBTB49Q6ZSB9 765 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 DPPA4Q7L190 304 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 RHBDD1Q8TEB9 315 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 MMABQ96EY8 250 aaPredicted RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 PLEKHG4BQ96PX9 1271 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 DLGAP4Q9Y2H0 992 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TDRD6O60522 2096 aaKnown RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 MAGEB17A8MXT2 336 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 TP73O15350 636 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 HOXC11O43248 304 aaPredicted RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 VPS4BO75351 444 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ARNTP27540 789 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 CD38P28907 300 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 CCDC81Q6ZN84 652 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 GKN2Q86XP6 184 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 FAM9CQ8IZT9 166 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 PLEKHA8Q96JA3 519 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 JSRP1Q96MG2 331 aaPredicted RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 FCRL4Q96PJ5 515 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 TXLNGYQ9BZA5 131 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 H3BN98 237 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 GUCY1B2O75343 617 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ZNF217O75362 1048 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 MATN4O95460 622 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ENO2P09104 434 aaPredicted RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 MMP12P39900 470 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 DEF8Q6ZN54 512 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 SDR16C5Q8N3Y7 309 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ZDHHC1Q8WTX9 485 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 KAT2AQ92830 837 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 NELL2Q99435 816 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 REXO4Q9GZR2 422 aaKnown RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 ZCCHC3Q9NUD5 404 aaKnown RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 MAT2BQ9NZL9 334 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 PFKLP17858 780 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 CD9P21926 228 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 SAMD4BQ5PRF9 694 aaKnown RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 LYSMD4Q5XG99 296 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 RNF43Q68DV7 783 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 OR6Y1Q8NGX8 325 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 OR8K5Q8NH50 307 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ZNF317Q96PQ6 595 aaPredicted RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 ARNT2Q9HBZ2 717 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 MRM3Q9HC36 420 aaKnown RBP11.04□□□□□ -0.64
SNX13-202ENST00000409604 HCN2Q9UL51 889 aa11.04□□□□□ -0.64
SNX13-202ENST00000409604 MANBAO00462 879 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 HNRNPCL1O60812 293 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 PDYNP01213 254 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 MTHFD1P11586 935 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 CCINQ13939 588 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RABL3Q5HYI8 236 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 IRAK1BP1Q5VVH5 260 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 KHDRBS2Q5VWX1 349 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 TTLL10Q6ZVT0 673 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ULK2Q8IYT8 1036 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 CNPY4Q8N129 248 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 EID2Q8N6I1 236 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ADAMTS15Q8TE58 950 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RAB8BQ92930 207 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 BIRC7Q96CA5 298 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 PDFQ9HBH1 243 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 KIF13BQ9NQT8 1826 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 INTS7Q9NVH2 962 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 HCN3Q9P1Z3 774 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 OAS3Q9Y6K5 1087 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 TIPRLO75663 272 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 SRFP11831 508 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 CSTF2P33240 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX13-202ENST00000409604 HNRNPKP61978 463 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX13-202ENST00000409604 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 SKP1P63208 163 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 KHDC1Q4VXA5 237 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 TRIM61Q5EBN2 209 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NKAIN2Q5VXU1 208 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 SPESP1Q6UW49 350 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 CCDC116Q8IYX3 515 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 AADATQ8N5Z0 425 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 HAUS8Q9BT25 410 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ANKHQ9HCJ1 492 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 IGSF5Q9NSI5 407 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ZNF638Q14966 1978 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 VEGFDO43915 354 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 HS6ST1O60243 411 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ADPRHP54922 357 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ERVPABLB-1P60509 514 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 LETMD1Q6P1Q0 360 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 TMEM92Q6UXU6 159 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 VN1R5Q7Z5H4 357 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 TMIEQ8NEW7 156 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms