RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 FBXW2Q9UKT8 454 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 MGAT4BQ9UQ53 548 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 HEBP2Q9Y5Z4 205 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 SLIT3O75094 1523 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 VLDLRP98155 873 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PCLAFQ15004 111 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 SEC23BQ15437 767 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 CHCHD4Q8N4Q1 142 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 OR6K6Q8NGW6 343 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 DERL2Q9GZP9 239 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 CDH10Q9Y6N8 788 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 MROH1Q8NDA8 1641 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 TPST2O60704 377 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PORP16435 677 aaPredicted RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 VAMP2P63027 116 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PTGR1Q14914 329 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 RAB39AQ14964 217 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 TBRG1Q3YBR2 411 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 GHDCQ8N2G8 530 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PNLDC1Q8NA58 520 aaKnown RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 FBXL20Q96IG2 436 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 EXO5Q9H790 373 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 NEUROD4Q9HD90 331 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 IRF6O14896 467 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 B3GALT2O43825 422 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 VNN1O95497 513 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNF43-201ENST00000407977 GADD45AP24522 165 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ARL9Q6T311 187 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 CCDC54Q8NEL0 328 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 MTERF1Q99551 399 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 BCL7BQ9BQE9 202 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ACTR6Q9GZN1 396 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 LIN28AQ9H9Z2 209 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 UBQLN2Q9UHD9 624 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 FBP2O00757 339 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 DFNA5O60443 496 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 RASAL1O95294 804 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 MMP3P08254 477 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 IL1R2P27930 398 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 GPR152Q8TDT2 470 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 CDKN2AIPNLQ96HQ2 116 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 CCDC106Q9BWC9 280 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 FZD8Q9H461 694 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 CCM2LQ9NUG4 571 aaPredicted RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 IRAK2O43187 625 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 STBD1O95210 358 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 RPL6Q02878 288 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 MOGSQ13724 837 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 TRAM1Q15629 374 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 SNAP47Q5SQN1 464 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 SLC2A7Q6PXP3 512 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 TMEM220Q6QAJ8 160 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ZNF627Q7L945 461 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 FIBCD1Q8N539 461 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 WACQ9BTA9 647 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 TAS2R10Q9NYW0 307 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 TLR6Q9Y2C9 796 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 LRRN3E7EW58 273 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 AURKAO14965 403 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 RP2O75695 350 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 SIX3O95343 332 aaPredicted RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 CDH11P55287 796 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
RNF43-201ENST00000407977 GXYLT1Q4G148 440 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 OR2AJ1Q8NGZ0 328 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 KIAA1191Q96A73 305 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 LRRN3Q9H3W5 708 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 SCP2D1Q9UJQ7 156 aa12.64□□□□□ -0.39
RNF43-201ENST00000407977 LCHNA4D1U4 455 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 HAS3O00219 553 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 EBLN1P0CF75 366 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 ATP5A1P25705 553 aaKnown RBP12.63□□□□□ -0.39
RNF43-201ENST00000407977 DGKGP49619 791 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 HLCSP50747 726 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 RGL4Q8IZJ4 473 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 TMEM203Q969S6 136 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 HSH2DQ96JZ2 352 aa12.63□□□□□ -0.39
RNF43-201ENST00000407977 ELOA3DA6NLF2 546 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms