RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ADAMTS18Q8TE60 1221 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 ZFYVE21Q9BQ24 234 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 DPH7Q9BTV6 452 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 ACAT2Q9BWD1 397 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 ZNF700Q9H0M5 742 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 RIC8BQ9NVN3 520 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 TINAGQ9UJW2 476 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 CDC14AQ9UNH5 594 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 LOC102723996A0A087X1L8 192 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 OR2A25A4D2G3 310 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 RCCD1A6NED2 376 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 A8MUI8 341 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 PRMT5O14744 637 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 ICAM2P13598 275 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 GRIA1P42261 906 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 KIR3DL1P43629 444 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 EMP3P54852 163 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 PRAMEP78395 509 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 ACVR1Q04771 509 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 PCOLCEQ15113 449 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 HKDC1Q2TB90 917 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 PTRHD1Q6GMV3 140 aaKnown RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 CSNK1A1LQ8N752 337 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 MMABQ96EY8 250 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 TGIF2Q9GZN2 237 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 SYNPO2LQ9H987 977 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 MKKSQ9NPJ1 570 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 C14orf105Q9NVL8 296 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 MARCH4Q9P2E8 410 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 RUVBL1Q9Y265 456 aaKnown RBP13.82□□□□□ -0.2
VAMP1-203ENST00000400911 F8P00451 2351 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 NF1P21359 2839 aa13.82□□□□□ -0.2
VAMP1-203ENST00000400911 C2CD3Q4AC94 2353 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 ANXA5P08758 320 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 AGAP20933 346 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 ADRA1DP25100 572 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 SSTR2P30874 369 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 SMSP52788 366 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 EFNA3P52797 238 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 LONRF1Q17RB8 773 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 ZNF766Q5HY98 468 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
VAMP1-203ENST00000400911 LRRC8BQ6P9F7 803 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 TMEM205Q6UW68 189 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 PPP1R21Q6ZMI0 780 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 OTOAQ7RTW8 1153 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 CCDC170Q8IYT3 715 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 TC2NQ8N9U0 490 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 SLC35B2Q8TB61 432 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
VAMP1-203ENST00000400911 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 IMMP1LQ96LU5 166 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
VAMP1-203ENST00000400911 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 MKL2Q9ULH7 1088 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
VAMP1-203ENST00000400911 PCM1Q15154 2024 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 A0A0A6YYC8 382 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 IGHV3-20A0A0C4DH32 117 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 A0A0U1RQJ8 604 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TCRBV7S2A1N4TA0A589 114 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 FAM227AF5H4B4 570 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 I3L1I5 382 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 FOXS1O43638 330 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 SUN1O94901 812 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 CMPK1P30085 196 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 CCNFP41002 786 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 AP2B1P63010 937 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 MAT1AQ00266 395 aaKnown RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TESK1Q15569 626 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 SUSD1Q6UWL2 747 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 ZC3H7AQ8IWR0 971 aaKnown RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 FOPNLQ96NB1 174 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 PANX3Q96QZ0 392 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TUBB6Q9BUF5 446 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TSPAN10Q9H1Z9 355 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 P2RY12Q9H244 342 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 MRPS30Q9NP92 439 aaKnown RBP13.8□□□□□ -0.2
VAMP1-203ENST00000400911 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TEKT2Q9UIF3 430 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 ZNF835Q9Y2P0 537 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 TCAF1Q9Y4C2 921 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
VAMP1-203ENST00000400911 CNTRLQ7Z7A1 2325 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 IGKV1-8A0A0C4DH67 115 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 ERI2A8K979 691 aaKnown RBP13.79□□□□□ -0.2
VAMP1-203ENST00000400911 CD3EAPO15446 510 aaKnown RBP13.79□□□□□ -0.2
VAMP1-203ENST00000400911 VPS26AO75436 327 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 SEC24DO94855 1032 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-203ENST00000400911 CLDN14O95500 239 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 C8orf89P0DMQ9 161 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 TTPAP49638 278 aa13.79□□□□□ -0.2
VAMP1-203ENST00000400911 ST13P50502 369 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms