RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 PPM1HQ9ULR3 514 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 PCDHGB1Q9Y5G3 927 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 PPEF2O14830 753 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 PRKD3O94806 890 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 KLK1P06870 262 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 H1F0P07305 194 aaKnown RBP18.05■□□□□ 0.48
USP25-204ENST00000400183 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
USP25-204ENST00000400183 MAPK14Q16539 360 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 TPRG1Q6ZUI0 275 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 IFNL1Q8IU54 200 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 SLC25A36Q96CQ1 311 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 NEUROD4Q9HD90 331 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 PNO1Q9NRX1 252 aaKnown RBP18.05■□□□□ 0.48
USP25-204ENST00000400183 TAC3Q9UHF0 121 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 OAZ3Q9UMX2 235 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 CFL2Q9Y281 166 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 POFUT2Q9Y2G5 429 aa18.05■□□□□ 0.48
USP25-204ENST00000400183 A0A0J9YVX5 310 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 POP7O75817 140 aaKnown RBP18.04■□□□□ 0.48
USP25-204ENST00000400183 ZNF3P17036 446 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR3A3P47888 321 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR3A2P47893 321 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 DGKEP52429 567 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 TBX5Q99593 518 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 GPR22Q99680 433 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 BCAS3Q9H6U6 928 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 EDDM13A0A1B0GTR0 161 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 UPK3BL1B0FP48 263 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 UPK3BL2E5RIL1 263 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 PSMD9O00233 223 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 NDUFS4O43181 175 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR1I1O60431 355 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 C8BP07358 591 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR5AK3PQ8NH89 298 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CYB5D2Q8WUJ1 264 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 AUTS2Q8WXX7 1259 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 DGAT2Q96PD7 388 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 C14orf105Q9NVL8 296 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 MID1O15344 667 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 ITGA10O75578 1167 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 SEMA3DO95025 777 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CFHP08603 1231 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 DUOXA1Q1HG43 343 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CLEC12AQ5QGZ9 265 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR2T5Q6IEZ7 315 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 FAM43BQ6ZT52 329 aaPredicted RBP18.04■□□□□ 0.48
USP25-204ENST00000400183 SYVN1Q86TM6 617 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 THOC6Q86W42 341 aaKnown RBP18.04■□□□□ 0.48
USP25-204ENST00000400183 LINC00471Q8N535 108 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 AVL9Q8NBF6 648 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 OR2T29Q8NH02 315 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 TAMM41Q96BW9 452 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 MALT1Q9UDY8 824 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 ZNF726A6NNF4 738 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 TLR4O00206 839 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CDC7O00311 574 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 TOR1BO14657 336 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 SLC22A1O15245 554 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CLDN7O95471 211 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 ZNF33AQ06730 810 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
USP25-204ENST00000400183 SLC9A4Q6AI14 798 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 CNKSR3Q6P9H4 555 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 ELAC1Q9H777 363 aaKnown RBP18.04■□□□□ 0.48
USP25-204ENST00000400183 MCCC2Q9HCC0 563 aa18.04■□□□□ 0.48
USP25-204ENST00000400183 ZNF20P17024 532 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 XRCC1P18887 633 aaPredicted RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 SLC25A11Q02978 314 aaKnown RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 GALNT2Q10471 571 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 ENPP2Q13822 863 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 PLEKHG6Q3KR16 790 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 ZNF613Q6PF04 617 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 SLITRK4Q8IW52 837 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 SETD6Q8TBK2 473 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 YTHDF1Q9BYJ9 559 aaKnown RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 SIRPGQ9P1W8 387 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 SLC2A6Q9UGQ3 507 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 PCDHGA3Q9Y5H0 932 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 TRBC2A0A5B9 178 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 B4DGG1 531 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 KLF11O14901 512 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 ECHS1P30084 290 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 MAP3K8P41279 467 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 DGKQP52824 942 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 NPTX1Q15818 432 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 TFGQ92734 400 aaPredicted RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 KCTD7Q96MP8 289 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 FRMD6Q96NE9 622 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 PSKH2Q96QS6 385 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 SLC39A3Q9BRY0 314 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 APOC1P02654 83 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 OPN1SWP03999 348 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 ARMC10Q8N2F6 343 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 AKAP8O43823 692 aaKnown RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 ACSL1P33121 698 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 MLLT3P42568 568 aaPredicted RBP18.03■□□□□ 0.48
USP25-204ENST00000400183 CDK6Q00534 326 aa18.03■□□□□ 0.48
USP25-204ENST00000400183 SERINC3Q13530 473 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms