RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 NOP16Q9Y3C1 178 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ARGFXA6NJG6 315 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PRAMEF12O95522 483 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PAK4O96013 591 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 LAMP2P13473 410 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 NRIP1P48552 1158 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 MAP2K5Q13163 448 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 IKBKEQ14164 716 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SH3PXD2AQ5TCZ1 1133 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ANKRD22Q5VYY1 191 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CHSY3Q70JA7 882 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF598Q86UK7 904 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 FAM109AQ8N4B1 249 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ARMC5Q96C12 935 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 S100A16Q96FQ6 103 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 LRRC46Q96FV0 321 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 UBXN10Q96LJ8 280 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF578Q96N58 590 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 MRI1Q9BV20 369 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 RTFDC1Q9BY42 306 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 TTYH3Q9C0H2 523 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PCDHB5Q9Y5E4 795 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PRAMEF22A3QJZ6 481 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ADAMTS3O15072 1205 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 NME6O75414 186 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 AP2A1O95782 977 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 FMO3P31513 532 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 COQ5Q5HYK3 327 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 RAB41Q5JT25 222 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 OR8K5Q8NH50 307 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 FBXL8Q96CD0 374 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZBED3Q96IU2 234 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF641Q96N77 438 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 NT5DC2Q9H857 520 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SGK2Q9HBY8 427 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 TMEM59LQ9UK28 342 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PCDHGA8Q9Y5G5 932 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 NPHP4O75161 1426 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 OR5H15A6NDH6 313 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 OR5H14A6NHG9 310 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 OR5H1A6NKK0 313 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 E9PAM4 449 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 HCKP08631 526 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CERS1P27544 350 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CCKBRP32239 447 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SELENOVP59797 346 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PHYKPLQ8IUZ5 450 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 BOLLQ8N9W6 283 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 MALSU1Q96EH3 234 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PPM1MQ96MI6 270 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 WDR55Q9H6Y2 383 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 SEC61A2Q9H9S3 476 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ACTR10Q9NZ32 417 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 LRRIQ1Q96JM4 1722 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 MAGEB17A8MXT2 336 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 NKRFO15226 690 aaKnown RBP eCLIP8.19□□□□□ -1.14e-6■□□□□ 9.9
CHD8-201ENST00000399982 CLDN9O95484 217 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 AGR2O95994 175 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 CCR10P46092 362 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 RALGPS1Q5JS13 557 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 DCDC5Q6ZRR9 648 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PDCD1LG2Q9BQ51 273 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 IL25Q9H293 177 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SAV1Q9H4B6 383 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 AGO4Q9HCK5 861 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 GTF2IRD1Q9UHL9 959 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 PCTPQ9UKL6 214 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 A0A1B0GV50 99 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 NAP1L6A6NFF2 107 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SLC34A2O95436 690 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ZNF35P13682 527 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SSR2P43308 183 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 E2F1Q01094 437 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 DEFA6Q01524 100 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 NIPAL3Q6P499 406 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CHST9Q7L1S5 443 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TMPRSS11BQ86T26 416 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 SLC43A2Q8N370 569 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TCEANCQ8N8B7 351 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FUNDC2Q9BWH2 189 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 GATA5Q9BWX5 397 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 POTEKPQ9BYX7 375 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 LYARQ9NX58 379 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 MIOSQ9NXC5 875 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 MAP4K5Q9Y4K4 846 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 H0Y8G0 127 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TOR1BO14657 336 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 MMP8P22894 467 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SMSP52788 366 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 HNRNPKP61978 463 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD8-201ENST00000399982 CYCSP99999 105 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms