RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SLC25A52Q3SY17 297 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 IL23RQ5VWK5 629 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC39A5Q6ZMH5 540 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 GALNT5Q7Z7M9 940 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 TMEM161BQ8NDZ6 487 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 DNAJA4Q8WW22 397 aaPredicted RBP10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 SH3YL1Q96HL8 342 aaPredicted RBP10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 FAM83CQ9BQN1 747 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 PPP4R1LQ9P1A2 415 aa10.71□□□□□ -0.7
CACNA1C-216ENST00000399638 RNGTTO60942 597 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 RHOP08100 348 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 NR2C1P13056 603 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 HNRNPKP61978 463 aaKnown RBP eCLIP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 DNM1P34Q6PK57 102 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 FAM92BQ6ZTR7 304 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 KCNK18Q7Z418 384 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SAMD14Q8IZD0 417 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF808Q8N4W9 903 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF565Q8N9K5 539 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 MTMR14Q8NCE2 650 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CERS2Q96G23 380 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CYP2S1Q96SQ9 504 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 IFT27Q9BW83 186 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ADAMTS10Q9H324 1103 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SUV39H2Q9H5I1 410 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 GPN1Q9HCN4 374 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 KCNIP3Q9Y2W7 256 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 NDST3O95803 873 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 HRGP04196 525 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 QPCTQ16769 361 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CERS5Q8N5B7 392 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CNEP1R1Q8N9A8 125 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 BBS1Q8NFJ9 593 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 TTLQ8NG68 377 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 OR7G1Q8NGA0 311 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 DNAJA3Q96EY1 480 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 MAGEH1Q9H213 219 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PACSIN3Q9UKS6 424 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PCYT1BQ9Y5K3 369 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 MEGF6O75095 1541 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 LEFTY2O00292 366 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 AP2A2O94973 939 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PAPSS2O95340 614 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CHRM5P08912 532 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 TMEM198Q66K66 360 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 OR9K2Q8NGE7 335 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 OR2L2Q8NH16 312 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 STYXQ8WUJ0 223 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 VNN3Q9NY84 501 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PISDQ9UG56 409 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 HAT1O14929 419 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 HSPA7P48741 367 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 RPL14P50914 215 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CCDC80Q76M96 950 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 LINGO2Q7L985 606 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 OR14L1PQ8NHC6 308 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 TSACCQ96A04 125 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ERI3O43414 337 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 B4GALT4O60513 344 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 TGDSO95455 350 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF84P51523 738 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 NAGLUP54802 743 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 RPS21P63220 83 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CHIT1Q13231 466 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ADNP2Q6IQ32 1131 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ARHGAP36Q6ZRI8 547 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 STRADAQ7RTN6 431 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SPAG16Q8N0X2 631 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF540Q8NDQ6 660 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 DGCR14Q96DF8 476 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 C17orf62Q9BQA9 187 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 PDZD7Q9H5P4 517 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 SPATA7Q9P0W8 599 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 TMEM59LQ9UK28 342 aa10.7□□□□□ -0.7
CACNA1C-216ENST00000399638 CDC14CA4D256 554 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 PI15O43692 258 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 EDF1O60869 148 aaKnown RBP10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 ACTL6BO94805 426 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 FADS2O95864 444 aaKnown RBP10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 UROSP10746 265 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 CCNCP24863 283 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 HOXA10P31260 410 aaPredicted RBP10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC1A2P43004 574 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 SPATC1Q76KD6 591 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 MIPEPQ99797 713 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 DPEP3Q9H4B8 488 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF639Q9UID6 485 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 KCNU1A8MYU2 1149 aa10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 ANXA2P07355 339 aaKnown RBP10.69□□□□□ -0.7
CACNA1C-216ENST00000399638 HCKP08631 526 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms