RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 WBP1LQ9NX94 342 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 hCG_2039718K7EN88 272 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 EIF3FO00303 357 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-203ENST00000398969 PRAMEF4O60810 478 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 SOD2P04179 222 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 AOAHP28039 575 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 CBX3Q13185 183 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 DUOXA1Q1HG43 343 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 ADPRMQ3LIE5 342 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 DGKKQ5KSL6 1271 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 PRAMEF9Q5VWM5 478 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 LRRC66Q68CR7 880 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 NOXRED1Q6NXP6 359 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 DNAJB7Q7Z6W7 309 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-203ENST00000398969 GALNT10Q86SR1 603 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 ZZZ3Q8IYH5 903 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 SKA2Q8WVK7 121 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-203ENST00000398969 YIPF6Q96EC8 236 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 VMP1Q96GC9 406 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 REXO4Q9GZR2 422 aaKnown RBP24.82■■□□□ 1.56
COL13A1-203ENST00000398969 GMPPBQ9Y5P6 360 aa24.82■■□□□ 1.56
COL13A1-203ENST00000398969 PLXNB3Q9ULL4 1909 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ABHD14A-ACY1A0A1B0GW23 586 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 DIRAS1O95057 198 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 C8GP07360 202 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ACPPP15309 386 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 DNAJA1P31689 397 aaKnown RBP24.81■■□□□ 1.56
COL13A1-203ENST00000398969 TRPC1P48995 793 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 HSPA14Q0VDF9 509 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 VMACQ2NL98 169 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 NDNFQ8TB73 568 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 VOPP1Q96AW1 172 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 NEURL2Q9BR09 285 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 WDR12Q9GZL7 423 aaKnown RBP24.81■■□□□ 1.56
COL13A1-203ENST00000398969 CLEC4EQ9ULY5 219 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 CPQQ9Y646 472 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 CLIC1O00299 241 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 TOR1BO14657 336 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FPGTO14772 594 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 KCNK5O95279 499 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FABP3P05413 133 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 HIST1H2AGP0C0S8 130 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-203ENST00000398969 PCSK2P16519 638 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ENGP17813 658 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 HIST1H2ADP20671 130 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FPR1P21462 350 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 CDH3P22223 829 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 VLDLRP98155 873 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FRG2Q64ET8 278 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FAM217AQ8IXS0 508 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ASB11Q8WXH4 323 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ASIC4Q96FT7 647 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 HIST1H2AHQ96KK5 128 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 ALPK1Q96QP1 1244 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 FRG2BQ96QU4 278 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 PANX1Q96RD7 426 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 HIST1H2AJQ99878 128 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 H2AFJQ9BTM1 129 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 EBPLQ9BY08 206 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 NECTIN3Q9NQS3 549 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 SCN3BQ9NY72 215 aa24.81■■□□□ 1.56
COL13A1-203ENST00000398969 MBD1Q9UIS9 605 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-203ENST00000398969 SERPINB7O75635 380 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 ITGB8P26012 769 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 MASP1P48740 699 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 HNMTP50135 292 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 DEFB103AP81534 67 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 TPGS2Q68CL5 300 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 LINC00299Q6ZSB3 139 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 RFLNAQ6ZTI6 216 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 TPRG1Q6ZUI0 275 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 CYP2U1Q7Z449 544 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 VTCN1Q7Z7D3 282 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 TTC29Q8NA56 475 aaPredicted RBP24.8■■□□□ 1.56
COL13A1-203ENST00000398969 OR2AP1Q8NGE2 309 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 CSGALNACT1Q8TDX6 532 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 ZNF558Q96NG5 402 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 APOL4Q9BPW4 351 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 PDP1Q9P0J1 537 aaPredicted RBP24.8■■□□□ 1.56
COL13A1-203ENST00000398969 RPS6KA6Q9UK32 745 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 SLC22A14Q9Y267 594 aa24.8■■□□□ 1.56
COL13A1-203ENST00000398969 KPNA4O00629 521 aaPredicted RBP24.79■■□□□ 1.56
COL13A1-203ENST00000398969 NUAK1O60285 661 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 ATP6V1G1O75348 118 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 OR56A5P0C7T3 313 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 PRPS1L1P21108 318 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 HOXA9P31269 272 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 KDELR2P33947 212 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 LMAN2Q12907 356 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 TRIM16LQ309B1 348 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 SYT6Q5T7P8 510 aaPredicted RBP24.79■■□□□ 1.56
COL13A1-203ENST00000398969 TXNDC8Q6A555 127 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 VRK3Q8IV63 474 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 SLC39A11Q8N1S5 342 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 RNF175Q8N4F7 328 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 TMEM169Q96HH4 297 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 RHNO1Q9BSD3 238 aa24.79■■□□□ 1.56
COL13A1-203ENST00000398969 RC3H2Q9HBD1 1191 aaKnown RBP24.79■■□□□ 1.56
COL13A1-203ENST00000398969 TRNAU1APQ9NX07 287 aaKnown RBP24.79■■□□□ 1.56
COL13A1-203ENST00000398969 NDRG4Q9ULP0 352 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms