RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 MAGEB17A8MXT2 336 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ZSCAN9O15535 394 aaPredicted RBP12.72□□□□□ -0.37
PRAME-201ENST00000398741 DIRAS1O95057 198 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SOD2P04179 222 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ACPPP15309 386 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 PSMB9P28065 219 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 IDUAP35475 653 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 MAP2K4P45985 399 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SERPINB10P48595 397 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
PRAME-201ENST00000398741 RELAQ04206 551 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SRSF11Q05519 484 aaKnown RBP12.72□□□□□ -0.37
PRAME-201ENST00000398741 ABRQ12979 859 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 CHIT1Q13231 466 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SP140Q13342 867 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 PLEKHG6Q3KR16 790 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 KDM4DQ6B0I6 523 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SVOPQ8N4V2 548 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ZNF540Q8NDQ6 660 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ASB11Q8WXH4 323 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
PRAME-201ENST00000398741 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
PRAME-201ENST00000398741 SAMHD1Q9Y3Z3 626 aaKnown RBP12.72□□□□□ -0.37
PRAME-201ENST00000398741 NUAK1O60285 661 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 FAM20BO75063 409 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 ZNF821O75541 412 aaPredicted RBP12.71□□□□□ -0.37
PRAME-201ENST00000398741 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.37
PRAME-201ENST00000398741 EFEMP2O95967 443 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 MPC1LP0DKB6 136 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 JUNDP17535 347 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 CDH3P22223 829 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 CD70P32970 193 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 KDELR2P33947 212 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 PRMT2P55345 433 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 CXCR4P61073 352 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 MTAPQ13126 283 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 DGUOKQ16854 277 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 ZXDCQ2QGD7 858 aaPredicted RBP12.71□□□□□ -0.37
PRAME-201ENST00000398741 MPPE1Q53F39 396 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 GALNT10Q86SR1 603 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 P2RY8Q86VZ1 359 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 FAM217AQ8IXS0 508 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 RNF168Q8IYW5 571 aaPredicted RBP12.71□□□□□ -0.37
PRAME-201ENST00000398741 HSH2DQ96JZ2 352 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 ATG10Q9H0Y0 220 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 REEP1Q9H902 201 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 HMX1Q9NP08 348 aaPredicted RBP12.71□□□□□ -0.37
PRAME-201ENST00000398741 KRT84Q9NSB2 600 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 AASSQ9UDR5 926 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
PRAME-201ENST00000398741 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 TOR1BO14657 336 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 RGS10O43665 173 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 JRKO75564 520 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 FADS2O95864 444 aaKnown RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 CKMP06732 381 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 SRCP12931 536 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 JUPP14923 745 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 FSHRP23945 695 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 STK19P49842 368 aaPredicted RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 ST13P50502 369 aaKnown RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 SLC35A2P78381 396 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 IRF8Q02556 426 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 PTSQ03393 145 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 DGCR6Q14129 220 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 ZDHHC20Q5W0Z9 365 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 RFLNAQ6ZTI6 216 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 VTCN1Q7Z7D3 282 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 ADCK1Q86TW2 530 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 VRK3Q8IV63 474 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 RNF175Q8N4F7 328 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 SCLYQ96I15 445 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 P2RY13Q9BPV8 354 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 DUSP21Q9H596 190 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 SUV39H2Q9H5I1 410 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 CCNB1IP1Q9NPC3 277 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 NECTIN3Q9NQS3 549 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 INSL5Q9Y5Q6 135 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 IGLV3-16A0A075B6K0 115 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 SLC16A5O15375 505 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 PRMT3O60678 531 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 KCNK5O95279 499 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 MT-ND2P03891 347 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 ATP1B2P14415 290 aaPredicted RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 LHCGRP22888 699 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 AP1S2P56377 157 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 VLDLRP98155 873 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 CYP4F8P98187 520 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 UGT8Q16880 541 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 PLEKHS1Q5SXH7 462 aa12.7□□□□□ -0.38
PRAME-201ENST00000398741 EIF3MQ7L2H7 374 aaKnown RBP12.7□□□□□ -0.38
PRAME-201ENST00000398741 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms