RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NRP2O60462 931 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 KLHL41O60662 606 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CTSVO60911 334 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SLCO2B1O94956 709 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 MED26O95402 600 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 RPN2P04844 631 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 APRTP07741 180 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 MMP11P24347 488 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PSMB5P28074 263 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SESN2P58004 480 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 VSX2P58304 361 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CRADDP78560 199 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 KCTD19Q17RG1 926 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CCSMST1Q4G0I0 132 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SEL1L2Q5TEA6 688 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PRAMEF13Q5VWM6 474 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PTRHD1Q6GMV3 140 aaKnown RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 KIRREL2Q6UWL6 708 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 UNC5DQ6UXZ4 953 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 MAMDC2Q7Z304 686 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 TTC29Q8NA56 475 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 TM9SF4Q92544 642 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 FKBP10Q96AY3 582 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SLC22A18Q96BI1 424 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 MIPEPQ99797 713 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SELENOSQ9BQE4 189 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CHRAC1Q9NRG0 131 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CATSPERZQ9NTU4 200 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 INTS7Q9NVH2 962 aaKnown RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 STOX2Q9P2F5 926 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 CTSFQ9UBX1 484 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 ANAPC5Q9UJX4 755 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 TTC7AQ9ULT0 858 aaPredicted RBP9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 SLC5A6Q9Y289 635 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
NIFKP1-201ENST00000398317 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 A0A0J9YVX5 310 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 CD3EAPO15446 510 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 PRICKLE3O43900 615 aaPredicted RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 C1orf105O95561 183 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 ONECUT2O95948 504 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 PIM1P11309 404 aaPredicted RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 NMBRP28336 390 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 DCTP40126 519 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 YBX1P67809 324 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 PLAURQ03405 335 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 GRM7Q14831 915 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 TMED2Q15363 201 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 RBBP7Q16576 425 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 ZC3H12BQ5HYM0 836 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 AARS2Q5JTZ9 985 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 TCTE1Q5JU00 501 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 WASHC2DQ5SRD0 308 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 AGAP7PQ5VUJ5 663 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 FRMPD2BQ6IN97 320 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 TTC23LQ6PF05 361 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 NLRP9Q7RTR0 991 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 SLC13A5Q86YT5 568 aaPredicted RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 PRSS58Q8IYP2 241 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 CCDC89Q8N998 374 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 GSDMBQ8TAX9 411 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 DNAJB14Q8TBM8 379 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 DENND1AQ8TEH3 1009 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 SKA2Q8WVK7 121 aaPredicted RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 UBE2Q2Q8WVN8 375 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 CNDP1Q96KN2 507 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 C5orf34Q96MH7 638 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 NSUN5Q96P11 429 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 AGAP4Q96P64 663 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 BARD1Q99728 777 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 WDR54Q9H977 334 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 PAK5Q9P286 719 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 GNPTGQ9UJJ9 305 aa9.37□□□□□ -0.91
NIFKP1-201ENST00000398317 SCN2AQ99250 2005 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 LOC105369274A0A096LPK9 316 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 LOC102723532A0A0G2JNH3 316 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 HYKKA2RU49 373 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 FITM1A5D6W6 292 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 VSTM2BA6NLU5 285 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 TARM1B6A8C7 271 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 NDUFS3O75489 264 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 EIF2S1P05198 315 aaKnown RBP9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 RPL22P35268 128 aaKnown RBP9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 TTPAP49638 278 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 EIF3BP55884 814 aaKnown RBP9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 Q0VFX4 171 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 FASTKQ14296 549 aaKnown RBP9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 TUBB8Q3ZCM7 444 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 PCID2Q5JVF3 399 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 CTSL3PQ5NE16 218 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 IRAK1BP1Q5VVH5 260 aa9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 YOD1Q5VVQ6 348 aaPredicted RBP9.36□□□□□ -0.91
NIFKP1-201ENST00000398317 CNSTQ6PJW8 725 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms