RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 METTL25Q8N6Q8 603 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 EMC1Q8N766 993 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 OR10J5Q8NHC4 309 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 JOSD2Q8TAC2 188 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TESCQ96BS2 214 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ECSITQ9BQ95 431 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PNPLA3Q9NST1 481 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM140Q9NV12 185 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 DDX43Q9NXZ2 648 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 MARCOQ9UEW3 520 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 APPL1Q9UKG1 709 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF839A8K0R7 811 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 SPATA31C2B4DYI2 1134 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 M0QYV0 167 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 F9P00740 461 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 IL1R2P27930 398 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 IL12RB1P42701 662 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PHKA2P46019 1235 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FHITP49789 147 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 REEP5Q00765 189 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 DBPQ10586 325 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 NKAIN1Q4KMZ8 207 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 BCL7AQ4VC05 210 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ENTHD1Q8IYW4 607 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 DSELQ8IZU8 1212 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 OR2L5Q8NG80 312 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TFAP2BQ92481 460 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 USP7Q93009 1102 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ELP4Q96EB1 424 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 MRPL48Q96GC5 212 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF479Q96JC4 524 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 BIRC8Q96P09 236 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ARMC7Q9H6L4 198 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 DMRT3Q9NQL9 472 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CLEC5AQ9NY25 188 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 COA4Q9NYJ1 87 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CLEC2DQ9UHP7 191 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 BCAP29Q9UHQ4 241 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 GNPTGQ9UJJ9 305 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 WDFY3Q8IZQ1 3526 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 TRAV34A0A0B4J273 112 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A1B0GV90 55 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 VILLO15195 856 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 KCNAB3O43448 404 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GAS2O43903 313 aaKnown RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 IL18RAPO95256 599 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ONECUT2O95948 504 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GSNP06396 782 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 GP1BAP07359 652 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ITIH1P19827 911 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 AMPD1P23109 780 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CRATP43155 626 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 AKR1D1P51857 326 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF143P52747 638 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PRPS1P60891 318 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 C16orf72Q14CZ0 275 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNHIT3Q15649 155 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CA9Q16790 459 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 BTBD16Q32M84 506 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 RUNDC3AQ59EK9 446 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FAXCQ5TGI0 409 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 IER5Q5VY09 327 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 SPRYD7Q5W111 196 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 OR6B2Q6IFH4 312 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 SLCO6A1Q86UG4 719 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 LRRC17Q8N6Y2 441 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 C19orf18Q8NEA5 215 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CA5BP1Q8WTZ4 195 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ST8SIA2Q92186 375 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 Q9H521 79 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 RANBP3Q9H6Z4 567 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 RPF1Q9H9Y2 349 aaKnown RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 NDOR1Q9UHB4 597 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 CORO2BQ9UQ03 480 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FKBP7Q9Y680 259 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 WASF2Q9Y6W5 498 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 LRRC37A2A6NM11 1700 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 C2orf71A6NGG8 1288 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 TCAPO15273 167 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM155BO75949 473 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 LDLRP01130 860 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 BPGMP07738 259 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF8P17098 575 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 XRCC1P18887 633 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PEX2P28328 305 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PNLIPRP3Q17RR3 467 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 PIP5KL1Q5T9C9 394 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 DCAF15Q66K64 600 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 C18orf63Q68DL7 685 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 ETFRF1Q6IPR1 90 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 NDUFAF7Q7L592 441 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 SMIM15Q7Z3B0 74 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 OFCC1Q8IZS5 231 aa6.41□□□□□ -1.38
TM9SF4-202ENST00000398022 MCUQ8NE86 351 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms