RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 FPR1P21462 350 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 KCNA5P22460 613 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 SOWAHAQ2M3V2 549 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PTF1AQ7RTS3 328 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 LINC00471Q8N535 108 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TCEAL4Q96EI5 215 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 HSPBAP1Q96EW2 488 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 IFT46Q9NQC8 304 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TLR6Q9Y2C9 796 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PCDHGB1Q9Y5G3 927 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 A0A1W2PP18 115 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 DUXAA6NLW8 204 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 DISC1C4P0D8 188 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TLR4O00206 839 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 OIP5O43482 229 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PSMD8P48556 350 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 RGS19P49795 217 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 POMZP3Q6PJE2 187 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 SMARCD3Q6STE5 483 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF517Q6ZMY9 492 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 MBOAT1Q6ZNC8 495 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 LHFPL3Q86UP9 236 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 RELL1Q8IUW5 271 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 COX18Q8N8Q8 333 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 DNAJA4Q8WW22 397 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 CDKN2AIPNLQ96HQ2 116 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TSNAXQ99598 290 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PLEKHA1Q9HB21 404 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TUBG2Q9NRH3 451 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 FAM189A1O60320 539 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 NIPSNAP2O75323 286 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 INMTO95050 263 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 CSN2P05814 226 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 CD72P21854 359 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 GBX2P52951 348 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 DEFA6Q01524 100 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TXNRD3NBQ6F5E7 133 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 CEP76Q8TAP6 659 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 RBM18Q96H35 190 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 MAPKAP1Q9BPZ7 522 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TAPBPLQ9BX59 468 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 MIR1-1HGQ9H1L0 117 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TUBB1Q9H4B7 451 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 ZCCHC3Q9NUD5 404 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 OSER1Q9NX31 292 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 LOC100130705A0A1B0GUX0 176 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 AIPO00170 330 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 RBMXL2O75526 392 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 FAM163BP0C2L3 166 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 HSD3B1P14060 373 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 GSCP56915 257 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 TXNL4AP83876 142 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 HMGCS1Q01581 520 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 CSTF1Q05048 431 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF773Q6PK81 442 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 C15orf40Q8WUR7 153 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 LCN9Q8WX39 176 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 ASB15Q8WXK1 588 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 WRAP53Q9BUR4 548 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 ITM2CQ9NQX7 267 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 C14orf105Q9NVL8 296 aa10.01□□□□□ -0.81
LIMCH1-203ENST00000396595 H0YGN5 161 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MAFKO60675 156 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TPST2O60704 377 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CLPXO76031 633 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ENGP17813 658 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 HSD17B2P37059 387 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 GNALP38405 381 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 DSTNP60981 165 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ABHD18Q0P651 414 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MBLAC2Q68D91 279 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CLEC20AQ6ZU45 233 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MOB2Q70IA6 237 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CAND1Q86VP6 1230 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CCDC107Q8WV48 283 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 LMLNQ96KR4 655 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF641Q96N77 438 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 PTPN18Q99952 460 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 RAB11FIP5Q9BXF6 653 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC32A1Q9H598 525 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 PNO1Q9NRX1 252 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 FZD4Q9ULV1 537 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 NFS1Q9Y697 457 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 L7N2F9 121 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 DUSP11O75319 330 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 NPPAP01160 153 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 RLN2P04090 185 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CD53P19397 219 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TUBG1P23258 451 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC25A11Q02978 314 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 CLCA4Q14CN2 919 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TTLQ8NG68 377 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF420Q8TAQ5 688 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 AURKBQ96GD4 344 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 OR2B2Q9GZK3 357 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 PHF24Q9UPV7 400 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CPQQ9Y646 472 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms