RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 GGT1P19440 569 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 FPR1P21462 350 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 CD9P21926 228 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 IFNGR2P38484 337 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 DPP6P42658 865 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 CTSKP43235 329 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 CLCN7P51798 805 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 SLC7A9P82251 487 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 KCNAB2Q13303 367 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 LSAMPQ13449 338 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 KRR1Q13601 381 aaKnown RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 GNA13Q14344 377 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 NCF4Q15080 339 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 SKIV2LQ15477 1246 aaKnown RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 DGKKQ5KSL6 1271 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 Q6ZSR9 355 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 TMEM102Q8N9M5 508 aaPredicted RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 XAGE5Q8WWM1 108 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 Q96MT0 163 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 TOX2Q96NM4 488 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 TEFMQ96QE5 360 aaKnown RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 OSBPL10Q9BXB5 764 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 PCBD2Q9H0N5 130 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 TUBB1Q9H4B7 451 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 RERGLQ9H628 205 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 LIN28AQ9H9Z2 209 aaKnown RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 TLR9Q9NR96 1032 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 AGPAT4Q9NRZ5 378 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 FARSBQ9NSD9 589 aaKnown RBP6.37□□□□□ -1.39
BDNF-203ENST00000395978 ELOVL2Q9NXB9 296 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 SELENONQ9NZV5 590 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 KLHL3Q9UH77 587 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 TRIP11Q15643 1979 aa6.37□□□□□ -1.39
BDNF-203ENST00000395978 ZNF646O15015 1829 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SAP18O00422 153 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 SLC28A2O43868 658 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 NDUFS2O75306 463 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RFPL2O75678 378 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 BMP10O95393 424 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 FADS2O95864 444 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 F11P03951 625 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RB1P06400 928 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PFKLP17858 780 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 IDSP22304 550 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 NR4A1P22736 598 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MYF6P23409 242 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PTX3P26022 381 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 OXTRP30559 389 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CTSOP43234 321 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 CDH12P55289 794 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CSNK2BP67870 215 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MYBPC1Q00872 1141 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 DOC2AQ14183 400 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ZNF773Q6PK81 442 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 AHSA2Q719I0 299 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 GALNT13Q8IUC8 556 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MMAAQ8IVH4 418 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 DPP10Q8N608 796 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MFSD2AQ8NA29 543 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 BTN2A2Q8WVV5 523 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SORCS1Q8WY21 1168 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SLC46A2Q9BY10 475 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 BRINP2Q9C0B6 783 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 EPB41L1Q9H4G0 881 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 VAPAQ9P0L0 249 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CD300AQ9UGN4 299 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PAIP2BQ9ULR5 123 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 PRSS21Q9Y6M0 314 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PNMA8CA0A1B0GUJ8 204 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CACNB4O00305 520 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 MMP20O60882 483 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 APODP05090 189 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PCCBP05166 539 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SRPRAP08240 638 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 HSD3B1P14060 373 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 HSD3B2P26439 372 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PCYT1AP49585 367 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RPS13P62277 151 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 DEFB103AP81534 67 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 VMACQ2NL98 169 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PRAMEF14Q5SWL7 426 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PRAMEF13Q5VWM6 474 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CCSAPQ6IQ19 270 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 NPAS3Q8IXF0 933 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CYP4Z2PQ8N1L4 340 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PARP8Q8N3A8 854 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TMEM151AQ8N4L1 468 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ZNF784Q8NCA9 323 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 BPIFB1Q8TDL5 484 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 S100ZQ8WXG8 99 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 DPF3Q92784 378 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 EXOSC8Q96B26 276 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 C12orf43Q96C57 262 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 ZNF347Q96SE7 839 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 OR51B5Q9H339 312 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms