RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 VN1R4Q7Z5H5 301 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 CNTN4Q8IWV2 1026 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 TMEM102Q8N9M5 508 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 EEF1AKMT1Q8WVE0 214 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SMPDL3AQ92484 453 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 N4BP2L2Q92802 583 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 PTERQ96BW5 349 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 C19orf60Q96EN9 201 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 EBNA1BP2Q99848 306 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 TRIM51Q9BSJ1 452 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 RAB11FIP5Q9BXF6 653 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SLC29A3Q9BZD2 475 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SLC7A5P2Q9GIP4 190 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SLC26A1Q9H2B4 701 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SOX17Q9H6I2 414 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 ZC3H7BQ9UGR2 993 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 TAC3Q9UHF0 121 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 RUVBL1Q9Y265 456 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MAP4K5Q9Y4K4 846 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 HYKKA2RU49 373 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 CTAGE15A4D2H0 777 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 HAT1O14929 419 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 KDM1AO60341 852 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 SRPX2O60687 465 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PGAM1P18669 254 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PAMP19021 973 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 MMP11P24347 488 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ARSFP54793 590 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 SOX8P57073 446 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 GRM7Q14831 915 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ARHGAP19Q14CB8 494 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 FASTKD3Q14CZ7 662 aaKnown RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PHKG1Q16816 387 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 BBS9Q3SYG4 887 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 VWA2Q5GFL6 755 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 TCTE1Q5JU00 501 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 TEDDM1Q5T9Z0 273 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ICE2Q659A1 982 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 STEAP4Q687X5 459 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 HIBCHQ6NVY1 386 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 TTC23LQ6PF05 361 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PAQR3Q6TCH7 311 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 TMEM207Q6UWW9 146 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 KCNMB4Q86W47 210 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 RAB43Q86YS6 212 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 GALNT16Q8N428 558 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 AMER3Q8N944 861 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 FKBP10Q96AY3 582 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 CAPZA3Q96KX2 299 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 CCDC138Q96M89 665 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 FOPNLQ96NB1 174 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 NAP1L3Q99457 506 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 OLFM1Q99784 485 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ZFYVE21Q9BQ24 234 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 MACROD1Q9BQ69 325 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 TXLNGQ9NUQ3 528 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 IRAK4Q9NWZ3 460 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 NDOR1Q9UHB4 597 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 FBXL4Q9UKA2 621 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PDE10AQ9Y233 779 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 NTNG1Q9Y2I2 539 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF451Q9Y4E5 1061 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 PSAT1Q9Y617 370 aa8.44□□□□□ -1.06
ATG4A-205ENST00000394892 SNRNP200O75643 2136 aaKnown RBP8.44□□□□□ -1.06
ATG4A-205ENST00000394892 USP9YO00507 2555 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 IGLV3-12A0A075B6K2 115 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 E5RI56 91 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 H7BY64 318 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 AGPSO00116 658 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 SMAPO00193 183 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 TTI1O43156 1089 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 ZSCAN12O43309 604 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 LCMT2O60294 686 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 DPM1O60762 260 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PIAS1O75925 651 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 ALBP02768 609 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 CATP04040 527 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 EIF2S1P05198 315 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 CMPK1P30085 196 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 ELK3P41970 407 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 CARSP49589 748 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 KLC1Q07866 573 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 MYBPC3Q14896 1274 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PPP1R7Q15435 360 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 INPP5JQ15735 1006 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 SYT16Q17RD7 645 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 VWA5B1Q5TIE3 1220 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 YOD1Q5VVQ6 348 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 ATG9BQ674R7 924 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 HIST2H2BCQ6DN03 193 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 IGFL3Q6UXB1 125 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PRSS41Q7RTY9 318 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 HPS6Q86YV9 775 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 KLHL7Q8IXQ5 586 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms