RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PLCL2Q9UPR0 1127 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 KCTD3Q9Y597 815 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PCDHGA11Q9Y5H2 935 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PRSS51A0A1B0GVH4 220 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TMX2-CTNND1H3BSU7 103 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 UPK1BO75841 260 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 IFNA7P01567 189 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 DNTTP04053 509 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CSF2P04141 144 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ALPIP09923 528 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 UMPSP11172 480 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC2A4P14672 509 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 EPCAMP16422 314 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 EPB42P16452 691 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RPS3P23396 243 aaKnown RBP eCLIP5.54□□□□□ -1.52
RFFL-202ENST00000394597 DNAJB1P25685 340 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 POU1F1P28069 291 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 IDUAP35475 653 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 WASP42768 502 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RPS3AP61247 264 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 RACK1P63244 317 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 LIPEQ05469 1076 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 COX10Q12887 443 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SEMA3BQ13214 749 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 MAD2L1Q13257 205 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 INTS11Q5TA45 600 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 C22orf39Q6P5X5 142 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 BRAT1Q6PJG6 821 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RSPO2Q6UXX9 243 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 Q6ZVU0 165 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 HTR3DQ70Z44 454 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZNF767PQ75MW2 155 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SIMC1Q8NDZ2 872 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FIBINQ8TAL6 211 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CYB5D2Q8WUJ1 264 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 DEDD2Q8WXF8 326 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ARMC5Q96C12 935 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FAM120BQ96EK7 910 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 MED8Q96G25 268 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 DIRAS2Q96HU8 199 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 MYRFLQ96LU7 910 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FRMD6Q96NE9 622 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RBM4BQ9BQ04 359 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 GINS4Q9BRT9 223 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RBM4Q9BWF3 364 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC2A11Q9BYW1 496 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZBP1Q9H171 429 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ALG2Q9H553 416 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ABCB9Q9NP78 766 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 EXD2Q9NVH0 621 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 MKS1Q9NXB0 559 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CLDND1Q9NY35 253 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZNF624Q9P2J8 865 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 DUSP12Q9UNI6 340 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC9A8Q9Y2E8 581 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 BBIP1A8MTZ0 92 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FADS2P1A8MWK0 482 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PLOD2O00469 737 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 B4GAT1O43505 415 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SOCS5O75159 536 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PRKCGP05129 697 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 IL6P05231 212 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 S100A6P06703 90 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ANXA6P08133 673 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 LBPP18428 481 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 F8A1P23610 371 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 GDI1P31150 447 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FMO3P31513 532 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC6A4P31645 630 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ATP6V1E1P36543 226 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TALDO1P37837 337 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NSG1P42857 185 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PRIM2P49643 509 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CDH13P55290 713 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ABRQ12979 859 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TP53BP2Q13625 1128 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 C1DQ13901 141 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 EFR3AQ14156 821 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZNF460Q14592 562 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PCLAFQ15004 111 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 BCL2A1Q16548 175 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PLA2G4EQ3MJ16 856 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 XKRXQ6PP77 449 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ARSKQ6UWY0 536 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TPRG1Q6ZUI0 275 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CNTRLQ7Z7A1 2325 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZBTB2Q8N680 514 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 C2CD4AQ8NCU7 369 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 STON2Q8WXE9 905 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 GTF2H4Q92759 462 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 OTULINQ96BN8 352 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 LGALS12Q96DT0 336 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TXNDC15Q96J42 360 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TRMT61BQ9BVS5 477 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 MED28Q9H204 178 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TTYH1Q9H313 450 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 KRT84Q9NSB2 600 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms