RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SMPDL3AQ92484 453 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 PSMF1Q92530 271 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 HAS2Q92819 552 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 PLCD4Q9BRC7 762 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 ZNF160Q9HCG1 818 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 FAM114A2Q9NRY5 505 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 KLHL42Q9P2K6 505 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 VPS9D1Q9Y2B5 631 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 NSG1A0A0A6YYJ2 146 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 DYTNA2CJ06 578 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 ZNF839A8K0R7 811 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 H0YGG7 62 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 LRRTM2O43300 516 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 VAPBO95292 243 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 SERPINA7P05543 415 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 PRR35P0CG20 571 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 COX6A1P12074 109 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 TPSB2P20231 275 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 OGNP20774 298 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 FBLP22087 321 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 CDC25BP30305 580 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 ARF3P61204 181 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 CRADDP78560 199 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 PRDX1Q06830 199 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 FASTKQ14296 549 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 RPS6KA1Q15418 735 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 TPSAB1Q15661 275 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 ZRSR2Q15696 482 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 ZNF425Q6IV72 752 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 NEK10Q6ZWH5 1172 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 DTWD1Q8N5C7 304 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 METTL27Q8N6F8 245 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 FBXO15Q8NCQ5 510 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 MAIP1Q8WWC4 291 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 MFSD3Q96ES6 412 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 CNDP1Q96KN2 507 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 RNF32Q9H0A6 362 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 MKKSQ9NPJ1 570 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 SOX13Q9UN79 622 aa16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 RUVBL2Q9Y230 463 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-202ENST00000394082 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 LOC102723996A0A087X1L8 192 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 TRAV17A0A0B4J275 112 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 IDSB3KWA1 339 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 NRP2O60462 931 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 CCNDBP1O95273 360 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 BMP10O95393 424 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 EIF2S1P05198 315 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 CYC1P08574 325 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 ICAM2P13598 275 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 EZRP15311 586 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 CXCR2P25025 360 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 TNFSF10P50591 281 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 EMP2P54851 167 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 BASP1P80723 227 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 FAM53BQ14153 422 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 VWA2Q5GFL6 755 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 KIAA0930Q6ICG6 404 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 LINC00696Q6ZRV3 163 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 PAQR7Q86WK9 346 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 RELTQ969Z4 430 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 CABS1Q96KC9 395 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 OR2A5Q96R48 311 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 MRPS30Q9NP92 439 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 HOMER3Q9NSC5 361 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 OLAHQ9NV23 265 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 RIC8BQ9NVN3 520 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 ENTPD4Q9Y227 616 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 OSGIN2Q9Y236 505 aa16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 DIDO1Q9BTC0 2240 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-202ENST00000394082 IGHV1-45A0A0A0MS14 117 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 IGKV1-8A0A0C4DH67 115 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 ARHGEF33A8MVX0 844 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 NIPSNAP2O75323 286 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 CATP04040 527 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 FMO4P31512 558 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 RPA3P35244 121 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 MAGEA6P43360 314 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 ARG2P78540 354 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 ABATP80404 500 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 C1QL3Q5VWW1 255 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 LAPTM4BQ86VI4 370 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 CSNK1A1LQ8N752 337 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 CATSPER1Q8NEC5 780 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 INTS10Q9NVR2 710 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 SYBUQ9NX95 663 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 TRPC4Q9UBN4 977 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 GUCA1BQ9UMX6 200 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 RUVBL1Q9Y265 456 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 MRPS2Q9Y399 296 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 ZGRF1Q86YA3 2104 aa16.63■□□□□ 0.25
SNRPA1-202ENST00000394082 KRT87PA6NCN2 255 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 HNRNPRO43390 633 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 JRKO75564 520 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 PAMP19021 973 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 CHRM3P20309 590 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 MGAT1P26572 445 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 TDGF1P3P51864 188 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms