RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LSM3P62310 102 aaKnown RBP18.29■□□□□ 0.52
CBX1-202ENST00000393408 MAD2L1BPQ15013 274 aaPredicted RBP18.29■□□□□ 0.52
CBX1-202ENST00000393408 DGUOKQ16854 277 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 ATP13A5Q4VNC0 1218 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PTOV1Q86YD1 416 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 ASB11Q8WXH4 323 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 GLMNQ92990 594 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 VOPP1Q96AW1 172 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 NUP214P35658 2090 aaPredicted RBP18.29■□□□□ 0.52
CBX1-202ENST00000393408 SCN2BO60939 215 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 NADKO95544 446 aaPredicted RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 EPHA2P29317 976 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 SERPINA4P29622 427 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 PPP3CCP48454 512 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 WNT3P56703 355 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 VBP1P61758 197 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 SMN1Q16637 294 aaKnown RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 UGT8Q16880 541 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 DGKKQ5KSL6 1271 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 FRG2Q64ET8 278 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ERICH5Q6P6B1 374 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 CCDC81Q6ZN84 652 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 GPR155Q7Z3F1 870 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 DYNC2LI1Q8TCX1 351 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 CSGALNACT1Q8TDX6 532 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 FRG2BQ96QU4 278 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 PANX1Q96RD7 426 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 EBPLQ9BY08 206 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ALOXE3Q9BYJ1 711 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 KRBA1A5PL33 1030 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 RGS10O43665 173 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 NUAK1O60285 661 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 PSMB9P28065 219 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 TM4SF4P48230 202 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 HNMTP50135 292 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 IFITM3Q01628 133 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 HSPA14Q0VDF9 509 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ABRQ12979 859 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 LRRC66Q68CR7 880 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 TPRG1Q6ZUI0 275 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 CYP2U1Q7Z449 544 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 TSPYL5Q86VY4 417 aaPredicted RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 HORMAD1Q86X24 394 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 FAM217AQ8IXS0 508 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 RNF175Q8N4F7 328 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 SVOPQ8N4V2 548 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ZNF540Q8NDQ6 660 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ITPKCQ96DU7 683 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 HSH2DQ96JZ2 352 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 MYOCQ99972 504 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 BTBD2Q9BX70 525 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 ACOT13Q9NPJ3 140 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 INIPQ9NRY2 104 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 MBD1Q9UIS9 605 aaPredicted RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 ERVK-11Q9UQG0 969 aa18.28■□□□□ 0.52
CBX1-202ENST00000393408 SAMHD1Q9Y3Z3 626 aaKnown RBP18.28■□□□□ 0.52
CBX1-202ENST00000393408 IGLV3-16A0A075B6K0 115 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 TMEM221A6NGB7 291 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 MRPS14O60783 128 aaKnown RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 EPN2O95208 641 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 FADS2O95864 444 aaKnown RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 HIST1H2AGP0C0S8 130 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 HIST1H2ADP20671 130 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 ST13P50502 369 aaKnown RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 MVKQ03426 396 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 PERM1Q5SV97 790 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 KIAA1614Q5VZ46 1190 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 KIAA1841Q6NSI8 718 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 RFLNAQ6ZTI6 216 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 CBLL1Q75N03 491 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 EIF3MQ7L2H7 374 aaKnown RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 DNAJB7Q7Z6W7 309 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 CCDC71Q8IV32 467 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 VRK3Q8IV63 474 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 ARL14EPQ8N8R7 260 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 OR6Q1Q8NGQ2 317 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 SKA2Q8WVK7 121 aaPredicted RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 HIST1H2AHQ96KK5 128 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 HIST1H2AJQ99878 128 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 H2AFJQ9BTM1 129 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 CCNB1IP1Q9NPC3 277 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 KRT84Q9NSB2 600 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 DNAJC11Q9NVH1 559 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 PAIP2BQ9ULR5 123 aaKnown RBP18.27■□□□□ 0.52
CBX1-202ENST00000393408 CLEC4EQ9ULY5 219 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 SLC22A14Q9Y267 594 aa18.27■□□□□ 0.52
CBX1-202ENST00000393408 FAM20BO75063 409 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 OR56A5P0C7T3 313 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 BMP4P12644 408 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 MAGEA8P43361 318 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 SERPINB10P48595 397 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 ALDH7A1P49419 539 aaKnown RBP18.27■□□□□ 0.51
CBX1-202ENST00000393408 SRSF11Q05519 484 aaKnown RBP18.27■□□□□ 0.51
CBX1-202ENST00000393408 DGCR6Q14129 220 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 SYT12Q8IV01 421 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 CPA6Q8N4T0 437 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms