RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NFYCQ13952 458 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 USP39Q53GS9 565 aaKnown RBP14.46□□□□□ -0.09
MKS1-202ENST00000393119 ANKRD26P1Q6NSI1 321 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 IZUMO2Q6UXV1 221 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 SLCO4C1Q6ZQN7 724 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 IFNEQ86WN2 208 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 ZFAND4Q86XD8 727 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 SFTPA2Q8IWL1 248 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 SLC15A3Q8IY34 581 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 KIAA2013Q8IYS2 634 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 GPR156Q8NFN8 814 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 CDC26Q8NHZ8 85 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 LRRC58Q96CX6 371 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 PPP3R2Q96LZ3 170 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 CDX2Q99626 313 aaPredicted RBP14.46□□□□□ -0.09
MKS1-202ENST00000393119 GPATCH1Q9BRR8 931 aaKnown RBP14.46□□□□□ -0.09
MKS1-202ENST00000393119 DPEP2Q9H4A9 486 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 EPB41L1Q9H4G0 881 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 C6orf106Q9H6K1 298 aaPredicted RBP14.46□□□□□ -0.09
MKS1-202ENST00000393119 TRPV5Q9NQA5 729 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 PHPT1Q9NRX4 125 aaPredicted RBP14.46□□□□□ -0.09
MKS1-202ENST00000393119 C1orf109Q9NX04 203 aa14.46□□□□□ -0.09
MKS1-202ENST00000393119 ME2P23368 584 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 SLC6A2P23975 617 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 MRPS21P82921 87 aaKnown RBP14.46□□□□□ -0.1
MKS1-202ENST00000393119 AGERQ15109 404 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 FAM174BQ3ZCQ3 159 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 GTDC1Q4AE62 458 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 ZNF542PQ5EBM4 170 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 C6orf163Q5TEZ5 329 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 ENPP7Q6UWV6 458 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 ANKRD46Q86W74 232 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 OR1E3Q8WZA6 343 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 C12orf66Q96MD2 445 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 PPM1MQ96MI6 270 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 SLC29A3Q9BZD2 475 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 TPSD1Q9BZJ3 242 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 BTBD1Q9H0C5 482 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 CARS2Q9HA77 564 aaKnown RBP14.46□□□□□ -0.1
MKS1-202ENST00000393119 S100A14Q9HCY8 104 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 CUEDC1Q9NWM3 386 aaPredicted RBP14.46□□□□□ -0.1
MKS1-202ENST00000393119 TMEM181Q9P2C4 612 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 PRPF19Q9UMS4 504 aaKnown RBP14.46□□□□□ -0.1
MKS1-202ENST00000393119 SNX6Q9UNH7 406 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 CYP8B1Q9UNU6 501 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 INVSQ9Y283 1065 aa14.46□□□□□ -0.1
MKS1-202ENST00000393119 KANSL1LA0AUZ9 987 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 H3BNX3 289 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 KMOO15229 486 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 STATHP02808 62 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 ZCCHC18P0CG32 403 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 RANBP1P43487 201 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 FLOT2Q14254 428 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 PYCR3Q53H96 274 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 KIAA1161Q6NSJ0 714 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 METTL2BQ6P1Q9 378 aaKnown RBP14.45□□□□□ -0.1
MKS1-202ENST00000393119 PLD3Q8IV08 490 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 LINC01555Q8NAE3 123 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 OR7G3Q8NG95 312 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 HUS1BQ8NHY5 278 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 HHIPQ96QV1 700 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 FERD3LQ96RJ6 166 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 SPAG4Q9NPE6 437 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 CD300AQ9UGN4 299 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 MMP17Q9ULZ9 603 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 PPT2Q9UMR5 302 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 FAM234BA2RU67 622 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 CDH1P12830 882 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 SDC1P18827 310 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 RPS13P62277 151 aaKnown RBP14.45□□□□□ -0.1
MKS1-202ENST00000393119 SLBPQ14493 270 aaKnown RBP eCLIP14.45□□□□□ -0.1
MKS1-202ENST00000393119 MYBPC3Q14896 1274 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 GGTA1PQ4G0N0 100 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 C6orf10Q5SRN2 563 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 CAPN13Q6MZZ7 669 aaPredicted RBP14.45□□□□□ -0.1
MKS1-202ENST00000393119 OXR1Q8N573 874 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 ATL1Q8WXF7 558 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 MENTQ9BUN1 341 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 FOXQ1Q9C009 403 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 ZIM2Q9NZV7 527 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 TAC3Q9UHF0 121 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 NCKAP1Q9Y2A7 1128 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 SLC17A4Q9Y2C5 497 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 NEUROG3Q9Y4Z2 214 aa14.45□□□□□ -0.1
MKS1-202ENST00000393119 TGFB1P01137 390 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 NCK1P16333 377 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 AMD1P17707 334 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 MTPNP58546 118 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 LPCAT4Q643R3 524 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 RBM12BQ8IXT5 1001 aaKnown RBP14.44□□□□□ -0.1
MKS1-202ENST00000393119 DNASE1L2Q92874 299 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 CCT7Q99832 543 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 SORBS1Q9BX66 1292 aaKnown RBP14.44□□□□□ -0.1
MKS1-202ENST00000393119 SGPP1Q9BX95 441 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 EIF3LQ9Y262 564 aaKnown RBP14.44□□□□□ -0.1
MKS1-202ENST00000393119 KCNE2Q9Y6J6 123 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 AK5Q9Y6K8 562 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 FEZF1A0PJY2 475 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 PDZK1P1A8MUH7 402 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms