RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 B4DGG1 531 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 KCNJ13O60928 360 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 ATP5HO75947 161 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 SLC16A8O95907 504 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 RPN2P04844 631 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 EPORP19235 508 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 NAE1Q13564 534 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 TCHHL1Q5QJ38 904 aaPredicted RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 MYLK4Q86YV6 388 aaPredicted RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 KLHDC8AQ8IYD2 350 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 METTL6Q8TCB7 284 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 MED8Q96G25 268 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 MARK4Q96L34 752 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 ACTR8Q9H981 624 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PFDN4Q9NQP4 134 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 POLG2Q9UHN1 485 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 SLC22A14Q9Y267 594 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PCDHGA1Q9Y5H4 931 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 CAPN7Q9Y6W3 813 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 LINC00032P0C843 101 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 HTR6P50406 440 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 DUSP3P51452 185 aaPredicted RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 DAB2P98082 770 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 C14orf28Q4W4Y0 310 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 GUSBP11Q6P575 273 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 SYTL1Q8IYJ3 562 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PPFIBP2Q8ND30 876 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 ZNF480Q8WV37 535 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PATE1Q8WXA2 126 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 ZNF385DQ9H6B1 395 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 PRDM8Q9NQV8 689 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 RNF11Q9Y3C5 154 aa13.11□□□□□ -0.31
PTN-202ENST00000393083 CFAP20Q9Y6A4 193 aaKnown RBP13.11□□□□□ -0.31
PTN-202ENST00000393083 PDZK1P1A8MUH7 402 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 FFAR3O14843 346 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 GPR42O15529 346 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 VPS4BO75351 444 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 CLDN9O95484 217 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 IDSP22304 550 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 CALB2P22676 271 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 MAZP56270 477 aaKnown RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 CORO7P57737 925 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 TBPL1P62380 186 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 KLF10Q13118 480 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 ILKQ13418 452 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 XKR7Q5GH72 579 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 CAPRIN2Q6IMN6 1127 aaKnown RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 DUS1LQ6P1R4 473 aaKnown RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 IYDQ6PHW0 289 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 SCIMPQ6UWF3 145 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTN-202ENST00000393083 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 ARL14Q8N4G2 192 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 PHC3Q8NDX5 983 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 OR5K2Q8NHB8 316 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 RAD51AP1Q96B01 352 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 TUBGCP3Q96CW5 907 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 C12orf66Q96MD2 445 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 SLC29A3Q9BZD2 475 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 TRIT1Q9H3H1 467 aaKnown RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 TAGLN3Q9UI15 199 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 PLAGL1Q9UM63 463 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
PTN-202ENST00000393083 TDRKHQ9Y2W6 561 aaKnown RBP13.1□□□□□ -0.31
PTN-202ENST00000393083 CPED1A4D0V7 1026 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 UBDO15205 165 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
PTN-202ENST00000393083 RFPL3O75679 317 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 DNAJC8O75937 253 aaPredicted RBP13.09□□□□□ -0.31
PTN-202ENST00000393083 GP1BAP07359 652 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 F3P13726 295 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 PNLIPRP1P54315 467 aa13.09□□□□□ -0.31
PTN-202ENST00000393083 TSTA3Q13630 321 aaPredicted RBP13.09□□□□□ -0.31
PTN-202ENST00000393083 GGTA1PQ4G0N0 100 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms