RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ATG10Q9H0Y0 220 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 A0A1W2PQH9 124 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 KANTRA0A1W2PQU2 76 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 DCLK1O15075 740 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ARF5P84085 180 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 CRB2Q5IJ48 1285 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TXNDC5Q8NBS9 432 aaKnown RBP19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ATAD1Q8NBU5 361 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TMEM27Q9HBJ8 222 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ASF1AQ9Y294 204 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 NWD2Q9ULI1 1742 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 BMXP51813 675 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF678Q5SXM1 525 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 CGB2Q6NT52 195 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 OR13J1Q8NGT2 312 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF675Q8TD23 568 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 KIAA1191Q96A73 305 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 TMEM175Q9BSA9 504 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 FKBPLQ9UIM3 349 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MRPS17Q9Y2R5 130 aaKnown RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 PRORSD1PA6NEY8 169 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 PAPSS2O95340 614 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 GM2AP17900 193 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 LCN1P31025 176 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 PCDH1Q08174 1060 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 KLHL24Q6TFL4 600 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 GPALPP1Q8IXQ4 340 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 ZSCAN5AQ9BUG6 496 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 EBPLQ9BY08 206 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 FAM83DQ9H4H8 585 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MRM3Q9HC36 420 aaKnown RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 EMC3Q9P0I2 261 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 PRKAB1Q9Y478 270 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 PCDHGB1Q9Y5G3 927 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MAU2Q9Y6X3 613 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 DAPL1A0PJW8 107 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 SOCS2O14508 198 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 GPR1P46091 355 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 CLCNKBP51801 687 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 SCARB2Q14108 478 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 SOWAHAQ2M3V2 549 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 VARS2Q5ST30 1063 aaKnown RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 SERPINA9Q86WD7 417 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 HMCESQ96FZ2 354 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 CNDP2Q96KP4 475 aaKnown RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MEAF6Q9HAF1 191 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 KIAA1522Q9P206 1035 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 A0A0U1RQF3 1178 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 CSF2P04141 144 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MAP2K3P46734 347 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 NDUFA9Q16795 377 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MPPE1Q53F39 396 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 MAMDC4Q6UXC1 1216 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 SRFBP1Q8NEF9 429 aaKnown RBP19.19■□□□□ 0.66
SHANK1-203ENST00000391813 TRIM2Q9C040 744 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 OSBPL2Q9H1P3 480 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 CEPT1Q9Y6K0 416 aa19.19■□□□□ 0.66
SHANK1-203ENST00000391813 LCHNA4D1U4 455 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 NUAK1O60285 661 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 MSL3P1P0C860 447 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 CHERPQ8IWX8 916 aaKnown RBP19.18■□□□□ 0.66
SHANK1-203ENST00000391813 DPEP3Q9H4B8 488 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 DEC1Q9P2X7 70 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 UBQLN2Q9UHD9 624 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 CAPN14A8MX76 684 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 SNAI1O95863 264 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF81P51508 661 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 AP1S1P61966 158 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 HMGCS1Q01581 520 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 SLC35G1Q2M3R5 365 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 RAVER1Q8IY67 606 aaKnown RBP19.18■□□□□ 0.66
SHANK1-203ENST00000391813 GRIN3AQ8TCU5 1115 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 TMIGD2Q96BF3 282 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF486Q96H40 463 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-203ENST00000391813 TMEM80Q96HE8 168 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 C12orf66Q96MD2 445 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 DERL2Q9GZP9 239 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 MAT2BQ9NZL9 334 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 IKZF2Q9UKS7 526 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 RIMKLBQ9ULI2 386 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 FZD4Q9ULV1 537 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 MYH7BA7E2Y1 1941 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 A0A1W2PQ45 241 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-203ENST00000391813 A0A1W2PQY0 241 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 YJEFN3A6XGL0 299 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 MT-ND2P03891 347 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF132P52740 706 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 CLCA4Q14CN2 919 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 DUOXA1Q1HG43 343 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 PNCKQ6P2M8 343 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 SLC43A3Q8NBI5 491 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 OR10H4Q8NGA5 316 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF597Q96LX8 424 aa19.18■□□□□ 0.66
SHANK1-203ENST00000391813 H3BM21 787 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 G6PDP11413 515 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ANXA3P12429 323 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 TACR2P21452 398 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 GDF6Q6KF10 455 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms