RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PCGF3Q3KNV8 242 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 GRAMD1BQ3KR37 738 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 FAM98BQ52LJ0 330 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 EMBQ6PCB8 327 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 RPAINQ86UA6 219 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 NAXDQ8IW45 347 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 H1FOOQ8IZA3 346 aaPredicted RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 TMTC2Q8N394 836 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR7A2PQ8NGA2 310 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR6T1Q8NGN1 323 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF564Q8TBZ8 553 aaPredicted RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 MORC4Q8TE76 937 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PHF10Q8WUB8 498 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 CCDC107Q8WV48 283 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 FRAT1Q92837 279 aaPredicted RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 STARD4Q96DR4 205 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PPP1R16AQ96I34 528 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 FAM20AQ96MK3 541 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 FNDC11Q9BVV2 318 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PANK2Q9BZ23 570 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PPIL3Q9H2H8 161 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 IL1RAPQ9NPH3 570 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 RRP7BPQ9NSQ0 103 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 SMC4Q9NTJ3 1288 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 TAS2R14Q9NYV8 317 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ABCG2Q9UNQ0 655 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PIAS3Q9Y6X2 628 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRBV5-5A0A0J9YX44 114 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 FAM237BA0A1B0GVD1 139 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 EIF3FO00303 357 aaPredicted RBP0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF861PO60384 105 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 SRPX2O60687 465 aaPredicted RBP0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 STAM2O75886 525 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 KRT33AO76009 404 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 RSL1D1O76021 490 aaKnown RBP0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 CD5P06127 495 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 CNTFP26441 200 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ARSEP51690 589 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 WNT4P56705 351 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 VAMP2P63027 116 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 MYL7Q01449 175 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 TLE2Q04725 743 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 LRRC63Q05C16 580 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 CA9Q16790 459 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ISXQ2M1V0 245 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 TMPRSS11FQ6ZWK6 438 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 NUDT13Q86X67 352 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF547Q8IVP9 402 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 UBQLNLQ8IYU4 475 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 SCYL3Q8IZE3 742 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF525Q8N782 197 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 PIGBQ92521 554 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 DHX58Q96C10 678 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 MARCH7Q9H992 704 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRPV4Q9HBA0 871 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 PATZ1Q9HBE1 687 aaKnown RBP0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 NENFQ9UMX5 172 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 SELENOKQ9Y6D0 94 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 MYO10Q9HD67 2058 aa0.68□□□□□ -2.3
RNU6-239P-201ENST00000390990 ITGB4P16144 1822 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRGV8A0A0C4DH27 118 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 SCAMP1O15126 338 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF749O43361 778 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 TSC22D2O75157 780 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 CREG1O75629 220 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 KBTBD11O94819 623 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ACSL3O95573 720 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 POLBP06746 335 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 SPARCP09486 303 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 GP1BBP13224 206 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 PRLRP16471 622 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 TMEM11P17152 192 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 GABRA5P31644 462 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 RIDAP52758 137 aaKnown RBP0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 IST1P53990 364 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 STX17P56962 302 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ERVPABLB-1P60509 514 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 NAAAQ02083 359 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF33BQ06732 778 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 MORC3Q14149 939 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZSCAN23Q3MJ62 389 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ALDH1L2Q3SY69 923 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 UGT3A2Q3SY77 523 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 FIGLAQ6QHK4 219 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 CARM1Q86X55 608 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 ARID3BQ8IVW6 561 aaPredicted RBP0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 GPC2Q8N158 579 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 FAM89BQ8N5H3 189 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 TDRD5Q8NAT2 981 aaKnown RBP0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 PAPD5Q8NDF8 572 aaKnown RBP0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 METTL6Q8TCB7 284 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 KCNE4Q8WWG9 221 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 C11orf52Q96A22 123 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 SLC39A13Q96H72 371 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 C1orf74Q96LT6 269 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 MXD3Q9BW11 206 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 DNAI2Q9GZS0 605 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 PLK3Q9H4B4 646 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 TLE6Q9H808 572 aa0.67□□□□□ -2.3
RNU6-239P-201ENST00000390990 RSPH14Q9UHP6 348 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms