RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 EMBQ6PCB8 327 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PAMR1Q6UXH9 720 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LDHAL6AQ6ZMR3 332 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TMPRSS11FQ6ZWK6 438 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 FCRLAQ7L513 359 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ARHGAP22Q7Z5H3 698 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 R3HCC1LQ7Z5L2 792 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RPAINQ86UA6 219 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 NUDT13Q86X67 352 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ANKRD18AQ8IVF6 992 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 HSCBQ8IWL3 235 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CCDC146Q8IYE0 955 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TEX11Q8IYF3 940 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CEP57L1Q8IYX8 460 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LGI2Q8N0V4 545 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PDILTQ8N807 584 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TCEANCQ8N8B7 351 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 Q8N9L7 120 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 AVL9Q8NBF6 648 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 OR4D10Q8NGI6 311 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 MOSPD2Q8NHP6 518 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ETNPPLQ8TBG4 499 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RNF138Q8WVD3 245 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 HTRA1Q92743 480 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ARHGEF2Q92974 986 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PERPQ96FX8 193 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 C4orf45Q96LM5 186 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 C1orf74Q96LT6 269 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TAAR6Q96RI8 345 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RPS6KC1Q96S38 1066 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CCDC3Q9BQI4 270 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CHRDL1Q9BU40 450 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PCGF6Q9BYE7 350 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 DEFB126Q9BYW3 111 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 OCR1Q9BZK8 76 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PAIP1Q9H074 479 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PDCL3Q9H2J4 239 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 DPAGT1Q9H3H5 408 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TRPV4Q9HBA0 871 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF275Q9NSD4 429 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TAS2R10Q9NYW0 307 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 EHD2Q9NZN4 543 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 DHRS4-AS1Q9P1J3 65 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF319Q9P2F9 582 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RSPH14Q9UHP6 348 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 KLK12Q9UKR0 248 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ABCG2Q9UNQ0 655 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CHKBQ9Y259 395 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GPR52Q9Y2T5 361 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TMED3Q9Y3Q3 217 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CMAHPQ9Y471 501 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ZFP37Q9Y6Q3 630 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SHROOM4Q9ULL8 1493 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GAKO14976 1311 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ZNFX1Q9P2E3 1918 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TRGV8A0A0C4DH27 118 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IGHV3-16A0A0C4DH30 117 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IGHV3-20A0A0C4DH32 117 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IQCMA0A1B0GVH7 501 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 A0A1W2PPH5 198 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 LOC105371045A0A1W2PR82 267 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 FRMD3A2A2Y4 597 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ANKUB1A6NFN9 424 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ERVV-1B6SEH8 477 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SLC1A7O00341 560 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PDXKO00764 312 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MEIS2O14770 477 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ARPC2O15144 300 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF749O43361 778 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ECE2O60344 883 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TSPAN1O60635 241 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF253O75346 499 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MED24O75448 989 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GJB3O75712 270 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 STAM2O75886 525 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TPPPO94811 219 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 LYPD3O95274 346 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ACTL6AO96019 429 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PIGRP01833 764 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ATP1B1P05026 303 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 OR2T7P0C7T2 308 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ATP1A3P13637 1013 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PRLRP16471 622 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SELEP16581 610 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 XBP1P17861 261 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MDKP21741 143 aaPredicted RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 AADACP22760 399 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 FASP25445 335 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PKLRP30613 574 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ALDH1B1P30837 517 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 RGS2P41220 211 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SLC15A1P46059 708 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SLC9A3P48764 834 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SUOXP51687 545 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ARSEP51690 589 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 DCDC1P59894 354 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TMF1P82094 1093 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 CDK3Q00526 305 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 NAAAQ02083 359 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 LRRC63Q05C16 580 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms