RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 STT3BQ8TCJ2 826 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 CNDP1Q96KN2 507 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 TCF12Q99081 682 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 ZFYVE21Q9BQ24 234 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 ZNF304Q9HCX3 659 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 MED16Q9Y2X0 877 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 MRFAP1Q9Y605 127 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 MYO9AB2RTY4 2548 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 CROCCQ5TZA2 2017 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 MYO7BQ6PIF6 2116 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 VSTM2BA6NLU5 285 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 MYO1CO00159 1063 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 PFDN6O15212 129 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 SLC16A8O95907 504 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 CATP04040 527 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 ZGLP1P0C6A0 271 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 PAMP19021 973 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 SLC1A2P43004 574 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 MAGEA6P43360 314 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 SOX8P57073 446 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 SNRPNP63162 240 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 SARNPP82979 210 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 MPP1Q00013 466 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 THOC5Q13769 683 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 PRTGQ2VWP7 1150 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 FAAH2Q6GMR7 532 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 LINC00696Q6ZRV3 163 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 Q6ZS92 163 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 LAPTM4BQ86VI4 370 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 PAQR7Q86WK9 346 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 SERPINB12Q96P63 405 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 WDR77Q9BQA1 342 aaPredicted RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 ZNF160Q9HCG1 818 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 HOMER3Q9NSC5 361 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 CUEDC1Q9NWM3 386 aaPredicted RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 ERRFI1Q9UJM3 462 aaPredicted RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 C3orf18Q9UK00 162 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 RUVBL1Q9Y265 456 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 COPG1Q9Y678 874 aaKnown RBP13.49□□□□□ -0.25
SHOX-202ENST00000381575 MAD1L1Q9Y6D9 718 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 PCNX1Q96RV3 2341 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 CREBBPQ92793 2442 aa13.49□□□□□ -0.25
SHOX-202ENST00000381575 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 FAM237BA0A1B0GVD1 139 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 P2RX6O15547 441 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 BANF1O75531 89 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 CBX6O95503 412 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 COILP38432 576 aaPredicted RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 ADARP55265 1226 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 OCA2Q04671 838 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 EEF1A2Q05639 463 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 SYT16Q17RD7 645 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 MUM1Q2TAK8 710 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 CRB2Q5IJ48 1285 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 ICE2Q659A1 982 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 ADCK2Q7Z695 626 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 TM9SF4Q92544 642 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 GPR21Q99679 349 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 SEMA3GQ9NS98 782 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 INTS10Q9NVR2 710 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 TRPC4Q9UBN4 977 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 PCYOX1Q9UHG3 505 aa13.48□□□□□ -0.25
SHOX-202ENST00000381575 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
SHOX-202ENST00000381575 ANKUB1A6NFN9 424 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 SDR42E2A6NKP2 422 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 SMAPO00193 183 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 HAT1O14929 419 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 KLHL18O94889 574 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 CELA2AP08217 269 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 ACPPP15309 386 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 COL8A1P27658 744 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 IRAK1BP1Q5VVH5 260 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
SHOX-202ENST00000381575 MBOAT1Q6ZNC8 495 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 SHISA5Q8N114 240 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 RASGEF1CQ8N431 466 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms