RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CSNK2BP67870 215 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 VMACQ2NL98 169 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 TTLL9Q3SXZ7 439 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 ZFP69Q49AA0 526 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 RASAL3Q86YV0 1011 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 USP7Q93009 1102 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 TPD52L3Q96J77 140 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 CEP295NLQ96MC4 621 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 NPAP1Q9NZP6 1156 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 RAI2Q9Y5P3 530 aa16.03■□□□□ 0.16
TRIM39-201ENST00000376656 CLCA1A8K7I4 914 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 TNFRSF10AO00220 468 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 WDR47O94967 919 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 SNX4O95219 450 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 KCNK5O95279 499 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 SLC15A1P46059 708 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 CHCHD4Q8N4Q1 142 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 TTC9BQ8N6N2 239 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 ST6GAL2Q96JF0 529 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 TAS2R16Q9NYV7 291 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 UBA2Q9UBT2 640 aaPredicted RBP16.02■□□□□ 0.16
TRIM39-201ENST00000376656 RPS6KA6Q9UK32 745 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 OARD1Q9Y530 152 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 ANKRD66B4E2M5 251 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 PDYNP01213 254 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 C9P02748 559 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 COL6A1P12109 1028 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 CR2P20023 1033 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 TACR2P21452 398 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 CA5AP35218 305 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 RGS6P49758 472 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 GRB14Q14449 540 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 PTRHD1Q6GMV3 140 aaKnown RBP16.02■□□□□ 0.16
TRIM39-201ENST00000376656 SERPINA11Q86U17 422 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 BOCQ9BWV1 1114 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 GABARAPL3Q9BY60 117 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 FAM126AQ9BYI3 521 aaPredicted RBP16.02■□□□□ 0.16
TRIM39-201ENST00000376656 PLSCR3Q9NRY6 295 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 SPASTQ9UBP0 616 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 TRPS1Q9UHF7 1281 aa16.02■□□□□ 0.16
TRIM39-201ENST00000376656 EVPLLA8MZ36 301 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 LOC110117498-PIK3R3F6TDL0 507 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 PDHXO00330 501 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 SEMA3DO95025 777 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 ENGP17813 658 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 ETV6P41212 452 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 CDK10Q15131 360 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 IQCCQ4KMZ1 466 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 PPP2R2DQ66LE6 453 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 PTOV1Q86YD1 416 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 OR8H2Q8N162 312 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 OR7G1Q8NGA0 311 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 TMEM184CQ9NVA4 438 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 FKBP14Q9NWM8 211 aa16.02■□□□□ 0.15
TRIM39-201ENST00000376656 TDRD15B5MCY1 1934 aaKnown RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PNMA8CA0A1B0GUJ8 204 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CLIC1O00299 241 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 KIAA0513O60268 411 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 EBLN1P0CF75 366 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PRKCAP17252 672 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 GGT2P36268 569 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PIK3CBP42338 1070 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 ARPC4P59998 168 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 BEND7Q8N7W2 519 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 SUSD3Q96L08 255 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 OR2A14Q96R47 310 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PLCXD1Q9NUJ7 323 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 M0R129 80 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 GFRA2O00451 464 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CHRNB1P11230 501 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 SDC1P18827 310 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 GPR50Q13585 617 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 IRF3Q14653 427 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 GALNT12Q8IXK2 581 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CLDN19Q8N6F1 224 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PIK3R3Q92569 461 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 DEPDC7Q96QD5 511 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 TMEM246Q9BRR3 403 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 NTMT1Q9BV86 223 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 FBXO44Q9H4M3 255 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CENPXA8MT69 81 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 M0QZ92 97 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CAPN5O15484 640 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 NBNO60934 754 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 CYP7B1O75881 506 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 IDH2P48735 452 aaKnown RBP16.01■□□□□ 0.15
TRIM39-201ENST00000376656 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 STX19Q8N4C7 294 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 TTYH2Q9BSA4 534 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 TAS2R9Q9NYW1 312 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 BTBD3Q9Y2F9 522 aa16.01■□□□□ 0.15
TRIM39-201ENST00000376656 EPB42P16452 691 aa16■□□□□ 0.15
TRIM39-201ENST00000376656 RRM2P31350 389 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms