RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SLC19A1P41440 591 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 COPZ1P61923 177 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 CPSF6Q16630 551 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■■■□□ 16.2
UPF3A-202ENST00000375299 RSBN1Q5VWQ0 802 aaPredicted RBP20.53■□□□□ 0.88
UPF3A-202ENST00000375299 OR4F3Q6IEY1 312 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 GDPD3Q7L5L3 318 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 HOMEZQ8IX15 550 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 MYDGFQ969H8 173 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 PLCXD1Q9NUJ7 323 aa20.53■□□□□ 0.88
UPF3A-202ENST00000375299 CA12O43570 354 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 SLC25A14O95258 325 aaPredicted RBP20.52■□□□□ 0.88
UPF3A-202ENST00000375299 SDC1P18827 310 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 RPS24P62847 133 aaKnown RBP20.52■□□□□ 0.88
UPF3A-202ENST00000375299 INO80DQ53TQ3 878 aaPredicted RBP20.52■□□□□ 0.88
UPF3A-202ENST00000375299 ERICH5Q6P6B1 374 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 MSANTD1Q6ZTZ1 278 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 CAB39Q9Y376 341 aaPredicted RBP20.52■□□□□ 0.88
UPF3A-202ENST00000375299 PRSS21Q9Y6M0 314 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 CBX4O00257 560 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 LRATO95237 230 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 KCNK5O95279 499 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 VIPP01282 170 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 CDK1P06493 297 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 RHOCP08134 193 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 DEFA1P59665 94 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 DEFA3P59666 94 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 C17orf99Q6UX52 265 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 SELENOMQ8WWX9 145 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 EID2BQ96D98 161 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 EMILIN2Q9BXX0 1053 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 GPR63Q9BZJ6 419 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 QPCTLQ9NXS2 382 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 RAPGEFL1Q9UHV5 662 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 PCDHGB6Q9Y5F9 930 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 PCDHGA3Q9Y5H0 932 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 PEX16Q9Y5Y5 336 aa20.52■□□□□ 0.88
UPF3A-202ENST00000375299 CLIC1O00299 241 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 STK16O75716 305 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 CCNKO75909 580 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 ENGP17813 658 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 NEK2P51955 445 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 MLIPQ5VWP3 458 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 GPR153Q6NV75 609 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 MBOAT1Q6ZNC8 495 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 ZBTB2Q8N680 514 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 CELF2-AS1Q8N7Q2 184 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 IL17RDQ8NFM7 739 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 SOCS4Q8WXH5 440 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 HHIPQ96QV1 700 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 FKBP14Q9NWM8 211 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 LOC100506127A0A0U1RQW1 187 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 KMOO15229 486 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 PRAMEF12O95522 483 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 CA5AP35218 305 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 AGAP6Q5VW22 663 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 NCEH1Q6PIU2 408 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 FAM151BQ6UXP7 276 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 Q6ZPB1 254 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-202ENST00000375299 PTOV1Q86YD1 416 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF280BQ86YH2 543 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 RASAL3Q86YV0 1011 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 RBFAQ8N0V3 343 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 DNAJC22Q8N4W6 341 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF675Q8TD23 568 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 GGHQ92820 318 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 AGAP4Q96P64 663 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 EPYCQ99645 322 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 OR51E2Q9H255 320 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 RETREG1Q9H6L5 497 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 RNF167Q9H6Y7 350 aa20.51■□□□□ 0.87
UPF3A-202ENST00000375299 MAPK1P28482 360 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 DUOXA1Q1HG43 343 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 PDE12Q6L8Q7 609 aaKnown RBP20.5■□□□□ 0.87
UPF3A-202ENST00000375299 KCNC2Q96PR1 638 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 RDH14Q9HBH5 336 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 ITM2CQ9NQX7 267 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 CLCA1A8K7I4 914 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 FPGTO14772 594 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 DPM1O60762 260 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 SNX4O95219 450 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 PRAMEF1O95521 474 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 APOA1P02647 267 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 KRT8P05787 483 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 GPX2P18283 190 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 HMGCLP35914 325 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 GGT2P36268 569 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 KIR3DL1P43629 444 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 TWF1Q12792 350 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 ARHGEF7Q14155 803 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 FBXO43Q4G163 708 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 SPATC1Q76KD6 591 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 NLGN4XQ8N0W4 816 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 CLDN19Q8N6F1 224 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 EGLN2Q96KS0 407 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 NDEL1Q9GZM8 345 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 FBXL12Q9NXK8 326 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 NPAP1Q9NZP6 1156 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 MKLN1Q9UL63 735 aa20.5■□□□□ 0.87
UPF3A-202ENST00000375299 IDH3BO43837 385 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 TLL1O43897 1013 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms