RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SPPL2CQ8IUH8 684 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 RASGRP3Q8IV61 690 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 C7orf61Q8IZ16 206 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 LIX1Q8N485 282 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 CMTM7Q96FZ5 175 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 HBEGFQ99075 208 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 CIB1Q99828 191 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 ACTL8Q9H568 366 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 EGFL7Q9UHF1 273 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 AURKCQ9UQB9 309 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 PCDHB3Q9Y5E6 796 aa7.98□□□□□ -1.13
UBR4-202ENST00000375224 FADS2P1A8MWK0 482 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CCRL2O00421 344 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PSIP1O75475 530 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 GNG2P59768 71 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ESRRGP62508 458 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TMEM115Q12893 351 aaPredicted RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 RABL3Q5HYI8 236 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 SERPINA13PQ6UXR4 307 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 DLEU7Q6UYE1 221 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PARS2Q7L3T8 475 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 IFNEQ86WN2 208 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ETFBKMTQ8IXQ9 262 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TBC1D21Q8IYX1 336 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TRPV3Q8NET8 790 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 SMARCD2Q92925 531 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TAMM41Q96BW9 452 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 METTL2AQ96IZ6 378 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 B3GNT4Q9C0J1 378 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 RMND5AQ9H871 391 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 SFXN1Q9H9B4 322 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 DYRK4Q9NR20 520 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ANAPC2Q9UJX6 822 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 H3BSA7 217 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 INPP4BO15327 924 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PDYNP01213 254 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 JUPP14923 745 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZNF26P17031 533 aaPredicted RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 CLDN8P56748 225 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 RPS14P62263 151 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 PPP2R2BQ00005 443 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 HMGCS1Q01581 520 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 GNA13Q14344 377 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 KIAA0040Q15053 153 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CYP51A1Q16850 503 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 HNRNPA1L2Q32P51 320 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 USP39Q53GS9 565 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 FBXL19Q6PCT2 694 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZBTB49Q6ZSB9 765 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 DSG4Q86SJ6 1040 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 RBM23Q86U06 439 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 NLRP8Q86W28 1048 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 VRK3Q8IV63 474 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 KLHDC8AQ8IYD2 350 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TERB1Q8NA31 727 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 MYLIPQ8WY64 445 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 DTD2Q96FN9 168 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZNF514Q96K75 400 aaPredicted RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZNF597Q96LX8 424 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 COQ10AQ96MF6 247 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 NSMCE2Q96MF7 247 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 P2RY13Q9BPV8 354 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 C9orf16Q9BUW7 83 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CLMPQ9H6B4 373 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 COQ10BQ9H8M1 238 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 MOV10Q9HCE1 1003 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZC4H2Q9NQZ6 224 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 KCNE1BA0A087WTH5 132 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 OR2AG2A6NM03 316 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 MTX2O75431 263 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZNF254O75437 659 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 TIPRLO75663 272 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 HOXB6P17509 224 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 EPORP19235 508 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ERVK-21P61565 698 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CREB5Q02930 508 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CSTF3Q12996 717 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 ELAVL3Q14576 367 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 CCDC58Q4VC31 144 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 INTS11Q5TA45 600 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 FRG2Q64ET8 278 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PPP4R4Q6NUP7 873 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 UGT2A3Q6UWM9 527 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 MSANTD1Q6ZTZ1 278 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PAPD5Q8NDF8 572 aaKnown RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 CSGALNACT1Q8TDX6 532 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 PMEPA1Q969W9 287 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 CENPNQ96H22 339 aaPredicted RBP7.97□□□□□ -1.13
UBR4-202ENST00000375224 ASB16Q96NS5 453 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 LRRC3BQ96PB8 259 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 FRG2BQ96QU4 278 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 DHRS9Q9BPW9 319 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 LMAN2LQ9H0V9 348 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 SEMA6AQ9H2E6 1030 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 SERHL2Q9H4I8 314 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 C12orf10Q9HB07 376 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 ZFP14Q9HCL3 533 aa7.97□□□□□ -1.13
UBR4-202ENST00000375224 FARSBQ9NSD9 589 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms