RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RNF175Q8N4F7 328 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR5K2Q8NHB8 316 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR14C36Q8NHC7 312 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GANCQ8TET4 914 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC5A11Q8WWX8 675 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TFGQ92734 400 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DNASE1L2Q92874 299 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TSSK3Q96PN8 268 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR52E6Q96RD3 313 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MTERF1Q99551 399 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TIMM29Q9BSF4 260 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC17A9Q9BYT1 436 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KCNH6Q9H252 994 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 VAPAQ9P0L0 249 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 EGFL7Q9UHF1 273 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TSC22D4Q9Y3Q8 395 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PIAS3Q9Y6X2 628 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DHRS12A0PJE2 317 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ZNF839A8K0R7 811 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 FOXE1O00358 373 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ERN1O75460 977 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GPIP06744 558 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 POU3F3P20264 500 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 S100A3P33764 101 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 AQP4P55087 323 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ACSM2AQ08AH3 577 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SPIN4Q56A73 249 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ACSM2BQ68CK6 577 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ANO7Q6IWH7 933 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 USP30Q70CQ3 517 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MSRB3Q8IXL7 192 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR5AR1Q8NGP9 310 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HUS1BQ8NHY5 278 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SH3GL1Q99961 368 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RMND5AQ9H871 391 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 BATF3Q9NR55 127 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TM7SF3Q9NS93 570 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SIRT5Q9NXA8 310 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SPATA7Q9P0W8 599 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MAGEL2Q9UJ55 1249 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CD207Q9UJ71 328 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CNOT11Q9UKZ1 510 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PPT2Q9UMR5 302 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SH2B3Q9UQQ2 575 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC17A4Q9Y2C5 497 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR1A2Q9Y585 309 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 A0A096LPI6 279 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TCRBV5S2A0A599 114 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KANSL1LA0AUZ9 987 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MAGEB17A8MXT2 336 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DFNA5O60443 496 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KCNJ13O60928 360 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MYO1DO94832 1006 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HOXB9P17482 250 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 IGFALSP35858 605 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MTPNP58546 118 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PHC1P78364 1004 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GRSF1Q12849 480 aaKnown RBP eCLIP17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SELPLGQ14242 412 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PRAMEF14Q5SWL7 426 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PRAMEF13Q5VWM6 474 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NXPE4Q6UWF7 544 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SPPL2CQ8IUH8 684 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CANT1Q8WVQ1 401 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 STARD8Q92502 1023 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CCDC115Q96NT0 180 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HAUS8Q9BT25 410 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OSBPL6Q9BZF3 934 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PAIP1Q9H074 479 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SERHLQ9NQF3 203 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GEMIN8Q9NWZ8 242 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MAPRE3Q9UPY8 281 aa17.38■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PIPSLA2A3N6 862 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PRR19A6NJB7 356 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC35G4P0C7Q5 338 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 UMPSP11172 480 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PSMA4P25789 261 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KLC1Q07866 573 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DDX39BQ13838 428 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLBPQ14493 270 aaKnown RBP eCLIP17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CYP2A13Q16696 494 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RUNDC3AQ59EK9 446 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CATSPEREQ5SY80 951 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CAPRIN2Q6IMN6 1127 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 IFNEQ86WN2 208 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SYT12Q8IV01 421 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ADGRG5Q8IZF4 528 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ICA1LQ8NDH6 482 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CHTF18Q8WVB6 975 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KLK6Q92876 244 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 UBE2E3Q969T4 207 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ITCHQ96J02 903 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NR1H4Q96RI1 486 aaPredicted RBP17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC6A17Q9H1V8 727 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC25A37Q9NYZ2 338 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HEATR5BQ9P2D3 2071 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CUL9Q8IWT3 2517 aa17.37■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HNRNPRO43390 633 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ETHE1O95571 254 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms