RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PTK2BQ14289 1009 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TGFBIQ15582 683 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 PPP1R3AQ16821 1122 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 BCL7AQ4VC05 210 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 KHDC1Q4VXA5 237 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 CDKL4Q5MAI5 379 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 ANKS6Q68DC2 871 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 METTL2BQ6P1Q9 378 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SBSNQ6UWP8 590 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 CLNKQ7Z7G1 428 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TICAM1Q8IUC6 712 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 IL22RA1Q8N6P7 574 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 PDPRQ8NCN5 879 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 OR6C4Q8NGE1 309 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 GPBAR1Q8TDU6 330 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 EXT2Q93063 718 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 MOCOSQ96EN8 888 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 C1QTNF2Q9BXJ5 285 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 ZCCHC2Q9C0B9 1178 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 COG4Q9H9E3 785 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SAR1AQ9NR31 198 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 ZFP69BQ9UJL9 534 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SLC12A4Q9UP95 1085 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 COQ6Q9Y2Z9 468 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TNPO3Q9Y5L0 923 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 DIDO1Q9BTC0 2240 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 NF1P21359 2839 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 PRR19A6NJB7 356 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 TRPC5OSA6NMA1 111 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ZNF891A8MT65 544 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 SLC16A5O15375 505 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 GRID2O43424 1007 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 SNX2O60749 519 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 GPC4O75487 556 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 TM7SF2O76062 418 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 SLCO2B1O94956 709 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 C8GP07360 202 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 SERPINA6P08185 405 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 FGF4P08620 206 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ENO2P09104 434 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 IGFALSP35858 605 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 MLLT10P55197 1068 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CORO7P57737 925 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CDKL1Q00532 357 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 SP140Q13342 867 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 KRT72Q14CN4 511 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 PCBP2Q15366 365 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 METTL21CQ5VZV1 264 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 RAET1GQ6H3X3 334 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CAPRIN2Q6IMN6 1127 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 TTC23LQ6PF05 361 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ADAMTSL4Q6UY14 1074 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 FRA10AC1Q70Z53 315 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 DET1Q7L5Y6 550 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CUZD1Q86UP6 607 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 HOMEZQ8IX15 550 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 RASGEF1AQ8N9B8 481 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ASZ1Q8WWH4 475 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ZNF514Q96K75 400 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 RILPQ96NA2 401 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 EBF4Q9BQW3 602 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 TRIM39Q9HCM9 518 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 CD274Q9NZQ7 290 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 RRP15Q9Y3B9 282 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 RNF215Q9Y6U7 377 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 ZFHX3Q15911 3703 aa10.89□□□□□ -0.67
CSNK1E-202ENST00000366216 FCHO1O14526 889 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 VEGFDO43915 354 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 HNRNPCL1O60812 293 aaKnown RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 VPS4BO75351 444 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 MTX2O75431 263 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SIX3O95343 332 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 MLYCDO95822 493 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 S100BP04271 92 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 GNLYP22749 145 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 DCTP40126 519 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 MAPK9P45984 424 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SCTRP47872 440 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 CLCQ05315 142 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ACTN3Q08043 901 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 LCP2Q13094 533 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ELOCQ15369 112 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 TBCCQ15814 346 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SH2D4BQ5SQS7 431 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 PHF19Q5T6S3 580 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SULT1C3Q6IMI6 304 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ADGRG6Q86SQ4 1221 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 RASGRP3Q8IV61 690 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 SLITRK4Q8IW52 837 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 CLYBLQ8N0X4 340 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 PELI3Q8N2H9 469 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 Q8N9G6 341 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 DENND6BQ8NEG7 585 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 NAT14Q8WUY8 206 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ELMO1Q92556 727 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms