RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SLC6A19Q695T7 634 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PRMT9Q6P2P2 845 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 KIRREL2Q6UWL6 708 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 KCNMB4Q86W47 210 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CNTN4Q8IWV2 1026 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CLEC1AQ8NC01 280 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GALNT11Q8NCW6 608 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CPT1CQ8TCG5 803 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 EBNA1BP2Q99848 306 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FAM167BQ9BTA0 163 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DDX47Q9H0S4 455 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MRPS30Q9NP92 439 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HS3ST3B1Q9Y662 390 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MAD1L1Q9Y6D9 718 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NBPF19A0A087WUL8 3843 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 USP27XA6NNY8 438 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZNF839A8K0R7 811 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TP73O15350 636 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 BANF1O75531 89 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IMPA1P29218 277 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CREG2Q8IUH2 290 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CPNE9Q8IYJ1 553 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZNF304Q9HCX3 659 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IARS2Q9NSE4 1012 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 STOX2Q9P2F5 926 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TAC3Q9UHF0 121 aa13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NXT1Q9UKK6 140 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 G3BP2Q9UN86 482 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZBTB14O43829 449 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TTC4O95801 387 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 AHSGP02765 367 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ERVK-10P10266 1014 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 EZRP15311 586 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 UQCRFS1P47985 274 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ABATP80404 500 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 AIMP2Q13155 320 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MUM1Q2TAK8 710 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PRAMEF13Q5VWM6 474 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IGFL2Q6UWQ7 119 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PIWIL4Q7Z3Z4 852 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GALNT7Q86SF2 657 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 METTL27Q8N6F8 245 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 STT3BQ8TCJ2 826 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MESP1Q9BRJ9 268 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NAT9Q9BTE0 207 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SOX17Q9H6I2 414 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SEMA3GQ9NS98 782 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CDC23Q9UJX2 597 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ADAMTS6Q9UKP5 1117 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 RUVBL1Q9Y265 456 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MDC1Q14676 2089 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DOPEY2Q9Y3R5 2298 aa13.02□□□□□ -0.32
TNFRSF1A-202ENST00000366159 A0A1W2PQ72 361 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SMAPO00193 183 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FOXS1O43638 330 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KLHL41O60662 606 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VPS26AO75436 327 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TSPAN12O95859 305 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SLC26A3P40879 764 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CDKN2DP55273 166 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SNRPNP63162 240 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KLC1Q07866 573 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 Q0VFX4 171 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SPANXN3Q5MJ09 141 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SHISA6Q6ZSJ9 500 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 UBE2R2Q712K3 238 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 BARD1Q99728 777 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CUEDC1Q9NWM3 386 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms