RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HOXA2O43364 376 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 EIF2S1P05198 315 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 PTPRRQ15256 657 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 LYPLAL1Q5VWZ2 237 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CDC73Q6P1J9 531 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF517Q6ZMY9 492 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TMCO6Q96DC7 493 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CORO1BQ9BR76 489 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 PRDM8Q9NQV8 689 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 DNAJC27Q9NZQ0 273 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 A0A0U1RQF3 1178 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 LDB2O43679 373 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 UGT2B17O75795 530 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 EPOP01588 193 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 FUCA1P04066 466 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 FGF4P08620 206 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GGT1P19440 569 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 KDELR2P33947 212 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ASMTP46597 345 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ATP12AP54707 1039 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 NOGQ13253 232 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ATAD3BQ5T9A4 648 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GALNT12Q8IXK2 581 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 LRRC17Q8N6Y2 441 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 OR8J3Q8NGG0 315 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 SUN5Q8TC36 379 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 DSN1Q9H410 356 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 MRPL39Q9NYK5 338 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GSAPA4D1B5 854 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 DNTTP04053 509 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 ANXA8P13928 327 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 ITIH1P19827 911 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 CRHBPP24387 322 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 SP3Q02447 781 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 CDK5R2Q13319 367 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 KIAA0319Q5VV43 1072 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 KDELC1Q6UW63 502 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 PLEKHG7Q6ZR37 379 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 RD3Q7Z3Z2 195 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 MINDY2Q8NBR6 621 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 FUBP3Q96I24 572 aaKnown RBP eCLIP13.52□□□□□ -0.24
COL6A1-201ENST00000361866 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.24
COL6A1-201ENST00000361866 MOV10Q9HCE1 1003 aaKnown RBP13.52□□□□□ -0.24
COL6A1-201ENST00000361866 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 CPQQ9Y646 472 aa13.52□□□□□ -0.24
COL6A1-201ENST00000361866 OAS3Q9Y6K5 1087 aaKnown RBP13.52□□□□□ -0.24
COL6A1-201ENST00000361866 ILVBLA1L0T0 632 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 ANKRD33BA6NCL7 494 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 M0R129 80 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 SSNA1O43805 119 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 NPPAP01160 153 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 MAL2Q969L2 176 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 C11orf24Q96F05 449 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PHOX2BQ99453 314 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PTPN18Q99952 460 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 CD244Q9BZW8 370 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 RHBGQ9H310 441 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 FAM83DQ9H4H8 585 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 HMX1Q9NP08 348 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF232Q9UNY5 417 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 SCML2Q9UQR0 700 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 SERPINB7O75635 380 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 GPR1P46091 355 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PURAQ00577 322 aaKnown RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 ZBTB6Q15916 424 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 TBPL2Q6SJ96 375 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 TEX47Q8TBZ9 253 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PIK3R3Q92569 461 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 POP5Q969H6 163 aaKnown RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 RDH12Q96NR8 316 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 TTYH2Q9BSA4 534 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 TM9SF3Q9HD45 589 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 MRPL17Q9NRX2 175 aaKnown RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 DUS2Q9NX74 493 aaKnown RBP13.52□□□□□ -0.25
COL6A1-201ENST00000361866 DHRS7Q9Y394 339 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PCDHB14Q9Y5E9 798 aa13.52□□□□□ -0.25
COL6A1-201ENST00000361866 PCDH7O60245 1069 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 MARCH8Q5T0T0 291 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 CAPN13Q6MZZ7 669 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 HDDC2Q7Z4H3 204 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 IZUMO1Q8IYV9 350 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF675Q8TD23 568 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SLC38A4Q969I6 547 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SLCO4A1Q96BD0 722 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms