RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 RGS21Q2M5E4 152 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 NAPRTQ6XQN6 538 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 MOAP1Q96BY2 351 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ZDHHC12Q96GR4 267 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PIWIL1Q96J94 861 aaKnown RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 COX4I2Q96KJ9 171 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 EPYCQ99645 322 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 EBF4Q9BQW3 602 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FARSBQ9NSD9 589 aaKnown RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 SPATA2Q9UM82 520 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PRSS51A0A1B0GVH4 220 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 C5AR1P21730 350 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FRMD7Q6ZUT3 714 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 CD320Q9NPF0 282 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 UTS2RQ9UKP6 389 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 TMEM98Q9Y2Y6 226 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 A0A1W2PP18 115 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 ZNF823P16415 610 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 MNDAP41218 407 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ZSWIM7Q19AV6 140 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PDCD4Q53EL6 469 aaKnown RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PACRGLQ8N7B6 248 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 RHBDL2Q9NX52 303 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 GDE1Q9NZC3 331 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FZD4Q9ULV1 537 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 APBB3O95704 486 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 GSTT1P30711 240 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 HMGCLP35914 325 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 HSFX1Q9UBD0 423 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 DENND5AQ6IQ26 1287 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 KIAA1161Q6NSJ0 714 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 EPGNQ6UW88 154 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 TMEM135Q86UB9 458 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 RIMKLBQ9ULI2 386 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 ENGP17813 658 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 ACRV1P26436 265 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 ZNF678Q5SXM1 525 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 PHF19Q5T6S3 580 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 ARHGAP40Q5TG30 622 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 PLA2G15Q8NCC3 412 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 GTPBP2Q9BX10 602 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 hCG_2039718K7EN88 272 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 TRIM3O75382 744 aaPredicted RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 MYBPC3Q14896 1274 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 UBASH3BQ8TF42 649 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 TRIM39Q9HCM9 518 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 FANCFQ9NPI8 374 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 PNO1Q9NRX1 252 aaKnown RBP13.1□□□□□ -0.31
LDB3-202ENST00000361373 MKS1Q9NXB0 559 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
LDB3-202ENST00000361373 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 RENP00797 406 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 CD2P06729 351 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 AOC1P19801 751 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 KCNA5P22460 613 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 PITX1P78337 314 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 ADGRE1Q14246 886 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 DECR1Q16698 335 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
LDB3-202ENST00000361373 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 FOXJ1Q92949 421 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 NELL2Q99435 816 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ZDHHC2Q9UIJ5 367 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 SNPHO15079 494 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ITM2AO43736 263 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ZNF217O75362 1048 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 LSM3P62310 102 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 PCDH1Q08174 1060 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ZNF763Q0D2J5 394 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 LRTOMTQ8WZ04 291 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms