RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CERS4Q9HA82 394 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 IFT80Q9P2H3 777 aaPredicted RBP21.91■■□□□ 1.1
LDB1-201ENST00000361198 E7EQ34 232 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 NPIPB8E9PQR5 432 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 RECQL5O94762 991 aaPredicted RBP21.9■■□□□ 1.1
LDB1-201ENST00000361198 AMD1P17707 334 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 GALK1P51570 392 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 TBC1D25Q3MII6 688 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 RUNDC3AQ59EK9 446 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 XKR6Q5GH73 641 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 LIPJQ5W064 366 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 PDE12Q6L8Q7 609 aaKnown RBP21.9■■□□□ 1.1
LDB1-201ENST00000361198 NLRP8Q86W28 1048 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 KIAA1958Q8N8K9 716 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 OR8D1Q8WZ84 308 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 FGF13Q92913 245 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 CCDC138Q96M89 665 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 MUS81Q96NY9 551 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 MTIF3Q9H2K0 278 aaKnown RBP21.9■■□□□ 1.1
LDB1-201ENST00000361198 PPT2Q9UMR5 302 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 REV3LO60673 3130 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 HEPACAM2A8MVW5 462 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 NPC1O15118 1278 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 SLC16A8O95907 504 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 B3GALT4O96024 378 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 CATP04040 527 aaKnown RBP21.9■■□□□ 1.1
LDB1-201ENST00000361198 RANBP1P43487 201 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 CHRNB3Q05901 458 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 KLHL35Q6PF15 583 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 TMIEQ8NEW7 156 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 SMARCD2Q92925 531 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 OR4K3Q96R72 315 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 SERHLQ9NQF3 203 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 TMEM9Q9P0T7 183 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 TMED5Q9Y3A6 229 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 PCDHB14Q9Y5E9 798 aa21.9■■□□□ 1.1
LDB1-201ENST00000361198 NUP214P35658 2090 aaPredicted RBP21.89■■□□□ 1.1
LDB1-201ENST00000361198 TRBV5-3A0A0A0MS03 114 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 EDDM13A0A1B0GTR0 161 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 SERTM1A2A2V5 107 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ANTXRLA6NF34 631 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 UGDHO60701 494 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 LRATO95237 230 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 IMPA1P29218 277 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 DOC2AQ14183 400 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ZNF234Q14588 700 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 MYBPC3Q14896 1274 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 GPR107Q5VW38 600 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ZNF548Q8NEK5 533 aaPredicted RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 WDR20Q8TBZ3 569 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ERLEC1Q96DZ1 483 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 RDH12Q96NR8 316 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 FAM129BQ96TA1 746 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 PAIP1Q9H074 479 aaKnown RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 UNC80Q8N2C7 3258 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 HPRP00739 348 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 JUNBP17275 347 aaPredicted RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 S100A3P33764 101 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 NRIP1P48552 1158 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ENTPD1P49961 510 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ZNF658BQ4V348 819 aaPredicted RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 NOXRED1Q6NXP6 359 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ZNF773Q6PK81 442 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 FKBP9P1Q75LS8 142 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ANKRD46Q86W74 232 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 PHACTR4Q8IZ21 702 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 OR52E4Q8NGH9 312 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 FNDC8Q8TC99 324 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ATL1Q8WXF7 558 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 FIG4Q92562 907 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 MAGEB10Q96LZ2 347 aaPredicted RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 MTERF1Q99551 399 aaKnown RBP21.89■■□□□ 1.09
LDB1-201ENST00000361198 PKP4Q99569 1192 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 DCUN1D5Q9BTE7 237 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 UGT2B28Q9BY64 529 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 ZDHHC4Q9NPG8 344 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 HPS4Q9NQG7 708 aa21.89■■□□□ 1.09
LDB1-201ENST00000361198 MUC22E2RYF6 1773 aaPredicted RBP21.88■■□□□ 1.09
LDB1-201ENST00000361198 MMP20O60882 483 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 THRBP10828 461 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 C6P13671 934 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 ADRB3P13945 408 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 MAPK1P28482 360 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 ELAVL3Q14576 367 aaKnown RBP21.88■■□□□ 1.09
LDB1-201ENST00000361198 NUS1Q96E22 293 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 AURKBQ96GD4 344 aaPredicted RBP21.88■■□□□ 1.09
LDB1-201ENST00000361198 TBCDQ9BTW9 1192 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 EBPLQ9BY08 206 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 OR2AG1Q9H205 316 aa21.88■■□□□ 1.09
LDB1-201ENST00000361198 LILRB5O75023 590 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 GMNNO75496 209 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 YAP1P46937 504 aaKnown RBP21.87■■□□□ 1.09
LDB1-201ENST00000361198 ELP6Q0PNE2 266 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 PGS1Q32NB8 556 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 RAET1GQ6H3X3 334 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 TESCQ96BS2 214 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 INPP5KQ9BT40 448 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 KCNH6Q9H252 994 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 EPHX3Q9H6B9 360 aa21.87■■□□□ 1.09
LDB1-201ENST00000361198 INVSQ9Y283 1065 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms