RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TOP3AQ13472 1001 aaPredicted RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 TP53BP2Q13625 1128 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 GPR153Q6NV75 609 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 KLK6Q92876 244 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 GLYATL1Q969I3 302 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ISOC1Q96CN7 298 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 HHIPL1Q96JK4 782 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 NLNQ9BYT8 704 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 PLGRKTQ9HBL7 147 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 XPNPEP2O43895 674 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 SDC1P18827 310 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 DPY19L1Q2PZI1 675 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 TRIM16LQ309B1 348 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 OR2T5Q6IEZ7 315 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ERICH5Q6P6B1 374 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 TTC29Q8NA56 475 aaPredicted RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 OR2T29Q8NH02 315 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 OTULINQ96BN8 352 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 CEP19Q96LK0 163 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ZNF583Q96ND8 569 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 NTMT1Q9BV86 223 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 CCDC177Q9NQR7 707 aaPredicted RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 GALNT8Q9NY28 637 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 DPP7Q9UHL4 492 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ZNF229Q9UJW7 825 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.85□□□□□ -0.67
SSU72-202ENST00000359060 HEMK1Q9Y5R4 338 aaPredicted RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 E7EQ34 232 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ARNTLO00327 626 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 BMP1P13497 986 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 YBX1P67809 324 aaKnown RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 RAB39AQ14964 217 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 MAPK11Q15759 364 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 MPP7Q5T2T1 576 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 AHSA2Q719I0 299 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 GET4Q7L5D6 327 aaPredicted RBP10.85□□□□□ -0.67
SSU72-202ENST00000359060 VTCN1Q7Z7D3 282 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 C17orf64Q86WR6 236 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 FAM86B1Q8N7N1 296 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 DACH2Q96NX9 599 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 IL21Q9HBE4 155 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 PLAGL1Q9UM63 463 aa10.85□□□□□ -0.67
SSU72-202ENST00000359060 ZSWIM8A7E2V4 1837 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 A0A096LPI6 279 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 VILLO15195 856 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 FZD6O60353 706 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 POP7O75817 140 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 CCNDBP1O95273 360 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PCCBP05166 539 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ADH5P11766 374 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 HRH2P25021 359 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 CTSCP53634 463 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 NKX3-2P78367 333 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 SLC7A9P82251 487 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ZSWIM9Q86XI8 627 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 CPXM2Q8N436 756 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 DPP10Q8N608 796 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PIK3C3Q8NEB9 887 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 TMEM98Q9Y2Y6 226 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 TMED5Q9Y3A6 229 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 MYO16Q9Y6X6 1858 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 LOC100506127A0A0U1RQW1 187 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 C1QTNF3-AMACRE9PGA6 284 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 H3BN98 237 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 TOR1BO14657 336 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 B3GALT4O96024 378 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 C1SP09871 688 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 AOAHP28039 575 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 RRM2P31350 389 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 VIPR2P41587 438 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 CDH12P55289 794 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PMS2P3Q13401 168 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ZNF805Q5CZA5 627 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ATG9BQ674R7 924 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 TRIM40Q6P9F5 258 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 EPHX4Q8IUS5 362 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 IMP3Q9NV31 184 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 THG1LQ9NWX6 298 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 ERAL1O75616 437 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 LAMP1P11279 417 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 JUPP14923 745 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PPIBP23284 216 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 SLC5A2P31639 672 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 STT3AP46977 705 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 MANFP55145 182 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 ELP6Q0PNE2 266 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 SGCGQ13326 291 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 CYP27C1Q4G0S4 372 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 IER5LQ5T953 404 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ZCCHC7Q8N3Z6 543 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 SVOPQ8N4V2 548 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 LILRA3Q8N6C8 439 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms