RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 IRS2Q9Y4H2 1338 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DPYSL4O14531 572 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PRODHO43272 600 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PTPN9P43378 593 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GLUD2P49448 558 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PON3Q15166 354 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SMYD5Q6GMV2 418 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 HDDC3Q8N4P3 179 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 C1orf216Q8TAB5 229 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ACOT12Q8WYK0 555 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ULBP1Q9BZM6 244 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TKTL2Q9H0I9 626 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MFSD1Q9H3U5 465 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MARK1Q9P0L2 795 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GMEB2Q9UKD1 530 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 A0A1W2PP18 115 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DAPL1A0PJW8 107 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MEIOCA2RUB1 952 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MOXD2PA6NHM9 499 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SMAD9O15198 467 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 LRCH4O75427 683 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 OR56A5P0C7T3 313 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CYP2A6P11509 494 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 HOXD13P35453 343 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 RBBP4Q09028 425 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ABRQ12979 859 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NTRK2Q16620 822 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 LCLAT1Q6UWP7 414 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CHCHD4Q8N4Q1 142 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TSPEARQ8WU66 669 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 AGO3Q9H9G7 860 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SMIM30A4D0T7 59 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 RPLP2P05387 115 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PIRTP0C851 137 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 THEGLP0DJG4 465 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SSTR2P30874 369 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DDOSTP39656 456 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CD79BP40259 229 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CACNG1Q06432 222 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 AVPI1Q5T686 147 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GPRC6AQ5T6X5 926 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DOK6Q6PKX4 331 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 IL31RAQ8NI17 732 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SPPL2BQ8TCT7 592 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MASTLQ96GX5 879 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ZYG11BQ9C0D3 744 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF408Q9H9D4 720 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PCDHGB5Q9Y5G0 923 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PXDNQ92626 1479 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SLC35F4A4IF30 521 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LYRM1O43325 122 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 FGL1Q08830 312 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TUBB3Q13509 450 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TMED9Q9BVK6 235 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MARCH2Q9P0N8 246 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RIMS3Q9UJD0 308 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LCMT2O60294 686 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ECI2O75521 394 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PAHP00439 452 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 IL1R2P27930 398 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CCR4P51679 360 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RGS1Q08116 209 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 GNASQ5JWF2 1037 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF782Q6ZMW2 699 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LRRC69Q6ZNQ3 347 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SLC30A8Q8IWU4 369 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ANKRD53Q8N9V6 530 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 COPS8Q99627 209 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ELAC1Q9H777 363 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ASF1BQ9NVP2 202 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 KANSL3Q9P2N6 904 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NLKQ9UBE8 527 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 A8MT66 165 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 STEAP3Q658P3 488 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 QSOX2Q6ZRP7 698 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 C15orf52Q6ZUT6 534 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR13F1Q8NGS4 319 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 BCL2L14Q9BZR8 327 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 KERAO60938 352 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SCGNO76038 276 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 AGTR1P30556 359 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 KRBOX4Q5JUW0 171 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LCN8Q6JVE9 175 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SSX6Q7RTT6 188 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ZC3H3Q8IXZ2 948 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR2L5Q8NG80 312 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ARMC5Q96C12 935 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SPACA6W5XKT8 324 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MROH2AA6NES4 1674 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NEMP2A6NFY4 417 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CCL22O00626 93 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 WDPCPO95876 746 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SRPRAP08240 638 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NDUFA9Q16795 377 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ARMC12Q5T9G4 340 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SMARCD3Q6STE5 483 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF366Q8N895 744 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CHDHQ8NE62 594 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RHOXF1Q8NHV9 184 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms