RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DPP10Q8N608 796 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 GPR152Q8TDT2 470 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ZNF583Q96ND8 569 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 PITX2Q99697 317 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 P2RY13Q9BPV8 354 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 POLG2Q9UHN1 485 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ADAM30Q9UKF2 790 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 GABRQQ9UN88 632 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 GRXCR2A6NFK2 248 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 AGRPO00253 132 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 SLC30A4O14863 429 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ORC5O43913 435 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 AP2A1O95782 977 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 HOXA9P31269 272 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 RPS19P39019 145 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 CLCN4P51793 760 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 TKTL1P51854 596 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MTPNP58546 118 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 SH3BP2P78314 561 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CSTF3Q12996 717 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 TP53BP2Q13625 1128 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CAMK1Q14012 370 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CSHL1Q14406 222 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 GPR33Q49SQ1 333 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ZNF678Q5SXM1 525 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CPZQ66K79 652 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 DLEU7Q6UYE1 221 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 PSTKQ8IV42 348 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 OR52E4Q8NGH9 312 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 L3HYPDHQ96EM0 354 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 COL21A1Q96P44 957 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 RBM14Q96PK6 669 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 DPYSL5Q9BPU6 564 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MLPHQ9BV36 600 aaPredicted RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CLCA3PQ9Y6N3 262 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 DNASE2O00115 360 aaPredicted RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 WWP2O00308 870 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 TGM6O95932 706 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 EPHA2P29317 976 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 POLR2JP52435 117 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 CRISP3P54108 245 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ABRQ12979 859 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 GTDC1Q4AE62 458 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MLIPQ5VWP3 458 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 SNX20Q7Z614 316 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ATCAYQ86WG3 371 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ENTHD1Q8IYW4 607 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MYLPFQ96A32 169 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 CSPG4P5Q96PW8 444 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 TUBB1Q9H4B7 451 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MAGIXQ9H6Y5 334 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 AIG1Q9NVV5 245 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 VNN3Q9NY84 501 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MAB21L2Q9Y586 359 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 OR6C65A6NJZ3 312 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 PLOD3O60568 738 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 SLC22A3O75751 556 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 GRAP2O75791 330 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 PTHP01270 115 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 HLA-DQB1P01920 261 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 ITGB5P18084 799 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CSKP41240 450 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 RORCP51449 518 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 UNC50Q53HI1 259 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 KIAA1614Q5VZ46 1190 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MZT2BQ6NZ67 158 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 RANBP10Q6VN20 620 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 SPATA19Q7Z5L4 167 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 OR11H4Q8NGC9 324 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 KIAA1143Q96AT1 154 aaPredicted RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 CELF6Q96J87 481 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 GFM1Q96RP9 751 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 BARD1Q99728 777 aaKnown RBP15.3■□□□□ 0.04
RTN3-205ENST00000356000 ASPNQ9BXN1 380 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 CD244Q9BZW8 370 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 MED9Q9NWA0 146 aa15.3■□□□□ 0.04
RTN3-205ENST00000356000 IQCMA0A1B0GVH7 501 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 UBA6A0AVT1 1052 aaPredicted RBP15.29■□□□□ 0.04
RTN3-205ENST00000356000 FABP12A6NFH5 140 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 K7ERI5 159 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CFDP00746 253 aaPredicted RBP15.29■□□□□ 0.04
RTN3-205ENST00000356000 GLAP06280 429 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 SELLP14151 372 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 TM4SF4P48230 202 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 UFM1P61960 85 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 ABATP80404 500 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 IRF5Q13568 498 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 LRRC66Q68CR7 880 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 DET1Q7L5Y6 550 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 MS4A15Q8N5U1 240 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms