RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 JAGN1Q8N5M9 183 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 VGLL2Q8N8G2 317 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 C2orf15Q8WU43 125 aaKnown RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 TMEM203Q969S6 136 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 SLC22A18Q96BI1 424 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 CDK15Q96Q40 435 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 IRF2BPLQ9H1B7 796 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 NOX1Q9Y5S8 564 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 E2F3O00716 465 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 SLC31A1O15431 190 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 ARL6IP5O75915 188 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 HSD3B1P14060 373 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 SLC3A1Q07837 685 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 SLBPQ14493 270 aaKnown RBP eCLIP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 P4HA3Q7Z4N8 544 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 BPIFB1Q8TDL5 484 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 C10orf82Q8WW14 230 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 LRRC58Q96CX6 371 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 TTYH2Q9BSA4 534 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 VPS29Q9UBQ0 182 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 DNAJB4Q9UDY4 337 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 NOP16Q9Y3C1 178 aaKnown RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 CAPN14A8MX76 684 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 H0YGN5 161 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 CCRL2O00421 344 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 DCKP27707 260 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 SYT16Q17RD7 645 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 DRICH1Q6PGQ1 229 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 PIGWQ7Z7B1 504 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 TMBIM1Q969X1 311 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 TM9SF2Q99805 663 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 MAPKAP1Q9BPZ7 522 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 FGFBP2Q9BYJ0 223 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 POLMQ9NP87 494 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 CLCA3PQ9Y6N3 262 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 CD72P21854 359 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 VAMP1P23763 118 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 AFF1P51825 1210 aaKnown RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 NRLP54845 237 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 RGMBQ6NW40 437 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF641Q96N77 438 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 BARD1Q99728 777 aaKnown RBP14.53□□□□□ -0.08
LMX1B-201ENST00000355497 AMBNQ9NP70 447 aa14.53□□□□□ -0.08
LMX1B-201ENST00000355497 RNF225M0QZC1 329 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-201ENST00000355497 SNAPC5O75971 98 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 ARL2P36404 184 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 MLLT3P42568 568 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-201ENST00000355497 GDF10P55107 478 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 TUBA1BP68363 451 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 CARD16Q5EG05 197 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 NCEH1Q6PIU2 408 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 TUBA1AQ71U36 451 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 EBF4Q9BQW3 602 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 NIFKQ9BYG3 293 aaKnown RBP14.52□□□□□ -0.08
LMX1B-201ENST00000355497 ISPDA4D126 451 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 J3QLW9 94 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF19P17023 458 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 HCAR3P49019 387 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 DAOAP59103 153 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF514Q96K75 400 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-201ENST00000355497 DEFB118Q96PH6 123 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 DPYSL5Q9BPU6 564 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 OXSMQ9NWU1 459 aa14.52□□□□□ -0.08
LMX1B-201ENST00000355497 I3L521 148 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 CLIC1O00299 241 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 PCDHGA12O60330 932 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 DUOXA1Q1HG43 343 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 SMG8Q8ND04 991 aaKnown RBP14.52□□□□□ -0.09
LMX1B-201ENST00000355497 OR5AK3PQ8NH89 298 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 TCEAL3Q969E4 200 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 C12orf43Q96C57 262 aaKnown RBP14.52□□□□□ -0.09
LMX1B-201ENST00000355497 TEX13DA0A0J9YY54 714 aaPredicted RBP14.52□□□□□ -0.09
LMX1B-201ENST00000355497 ADAMTS3O15072 1205 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 BCHEP06276 602 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 CD40LGP29965 261 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 RPL26P61254 145 aaKnown RBP14.52□□□□□ -0.09
LMX1B-201ENST00000355497 VMACQ2NL98 169 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 SLC29A4Q7RTT9 530 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 SLC22A16Q86VW1 577 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 SNX29P2Q8IUI4 249 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 ASB12Q8WXK4 309 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 RPL10LQ96L21 214 aaKnown RBP14.52□□□□□ -0.09
LMX1B-201ENST00000355497 SLC28A3Q9HAS3 691 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 OAZ3Q9UMX2 235 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 PRELID1Q9Y255 219 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 PCDHGB6Q9Y5F9 930 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.09
LMX1B-201ENST00000355497 LOC100509620A0A075B734 347 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TRBC2A0A5B9 178 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 COQ9O75208 318 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ITGA5P08648 1049 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SLC15A1P46059 708 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 NPAS4Q8IUM7 802 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 C4orf32Q8N8J7 132 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 PNPLA2Q96AD5 504 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 GNG8Q9UK08 70 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 DEPDC5O75140 1603 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms