RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ZFP36L2P47974 494 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MTPNP58546 118 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 BTG1P62324 171 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SH3BP2P78314 561 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 IL1RL1Q01638 556 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 UBE3AQ05086 875 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF33AQ06730 810 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 NFIAQ12857 509 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GBX1Q14549 363 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PGM5Q15124 567 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 BAK1Q16611 211 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GOLGA7BQ2TAP0 167 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 XKR7Q5GH72 579 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 C10orf62Q5T681 223 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SAXO2Q658L1 398 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OR2T5Q6IEZ7 315 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 KLHL17Q6TDP4 642 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CCDC149Q6ZUS6 474 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 DET1Q7L5Y6 550 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OVCH2Q7RTZ1 564 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TRMT1LQ7Z2T5 733 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GALNT5Q7Z7M9 940 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TMC8Q8IU68 726 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TRIM48Q8IWZ4 208 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 KLHDC8BQ8IXV7 354 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SPATA6LQ8N4H0 392 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 DNAJC22Q8N4W6 341 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CAMKK1Q8N5S9 505 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 LRRC17Q8N6Y2 441 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF557Q8N988 423 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OR9Q1Q8NGQ5 310 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 OR2T29Q8NH02 315 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 IL31RAQ8NI17 732 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RHEBL1Q8TAI7 183 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ANKRD49Q8WVL7 239 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 CREB3L1Q96BA8 519 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RHBDF1Q96CC6 855 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RNF31Q96EP0 1072 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PYURFQ96I23 114 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 RPL10LQ96L21 214 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF583Q96ND8 569 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FERD3LQ96RJ6 166 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 APOL2Q9BQE5 337 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MLPHQ9BV36 600 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 NT5C1AQ9BXI3 368 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 GABARAPL3Q9BY60 117 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 PPIL3Q9H2H8 161 aaKnown RBP7.91□□□□□ -1.14
ATG4A-201ENST00000343524 POPDC3Q9HBV1 291 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 TMEM39AQ9NV64 488 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 MED9Q9NWA0 146 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 COQ3Q9NZJ6 369 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 FAM8A1Q9UBU6 413 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 SNX8Q9Y5X2 465 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 ACTL7AQ9Y615 435 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 A0A0G2JMZ2 1700 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 LRRC37A2A6NM11 1700 aa7.91□□□□□ -1.14
ATG4A-201ENST00000343524 A0A087WZ62 844 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 A0A0U1RQS6 177 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 hCG_1807616A0A1W2PRN6 198 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 F8W810 466 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 KPNA5O15131 536 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 WBP4O75554 376 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 MLYCDO95822 493 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 DNTTP04053 509 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ITGB1P05556 798 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 LINC00032P0C843 101 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 CYP4B1P13584 511 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 AKT1P31749 480 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 SOX11P35716 441 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 TNFSF9P41273 254 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 PXNP49023 591 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 KCNQ1P51787 676 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 DIO3P55073 304 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 CDH8P55286 799 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF280AP59817 542 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 UFM1P61960 85 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 POLR2GP62487 172 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 YWHAHQ04917 246 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 CTBP1Q13363 440 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 LAPTM5Q13571 262 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 WSCD2Q2TBF2 565 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 FAM214AQ32MH5 1076 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 GLYR1Q49A26 553 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 MTERF2Q49AM1 385 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 MORN1Q5T089 497 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 DDI2Q5TDH0 399 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 METAP1DQ6UB28 335 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 KIAA1324Q6UXG2 1013 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 HSDL2Q6YN16 418 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 EIF3MQ7L2H7 374 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 BNIPLQ7Z465 357 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 KDELC2Q7Z4H8 507 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 DDX53Q86TM3 631 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ZSWIM9Q86XI8 627 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 RNF135Q8IUD6 432 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ZDHHC21Q8IVQ6 265 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 MFSD6LQ8IWD5 586 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 DENND6AQ8IWF6 608 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ZBTB8OSQ8IWT0 167 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms