RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 KDELR2P33947 212 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 ARL1P40616 181 aaPredicted RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 RPS14P62263 151 aaKnown RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 HMGCS1Q01581 520 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 PCDH1Q08174 1060 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 SLAMF1Q13291 335 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 ASAH1Q13510 395 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF235Q14590 738 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 VMACQ2NL98 169 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 DUSP28Q4G0W2 176 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 GPAT3Q53EU6 434 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 METTL2BQ6P1Q9 378 aaKnown RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 GLT6D1Q7Z4J2 308 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 SAPCD2Q86UD0 394 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 RGL4Q8IZJ4 473 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 CACTIN-AS1Q8N1I8 211 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 MDGA1Q8NFP4 955 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 C7orf34Q96L11 122 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 MCCC1Q96RQ3 725 aaPredicted RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 TTYH2Q9BSA4 534 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 TRAF4Q9BUZ4 470 aaPredicted RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 CDCA4Q9BXL8 241 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 SLC29A3Q9BZD2 475 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 P2RY12Q9H244 342 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 ELOVL2Q9NXB9 296 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
HOXA1-201ENST00000343060 DHRS7Q9Y394 339 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 AP1M2Q9Y6Q5 423 aa9.39□□□□□ -0.91
HOXA1-201ENST00000343060 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 A0A1W2PQH9 124 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 KRT87PA6NCN2 255 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 A8MV72 311 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 CXCL11O14625 94 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 F2P00734 622 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 VIPP01282 170 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ALPPP05187 535 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 STSP08842 583 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 SMPD1P17405 629 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 M6PRP20645 277 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 NUDT1P36639 197 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GPLD1P80108 840 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 BNC1Q01954 994 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF79Q15937 498 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 SLC39A12Q504Y0 691 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 CEP78Q5JTW2 689 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 VTCN1Q7Z7D3 282 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 FAM124AQ86V42 546 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 PTOV1Q86YD1 416 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 RDH10Q8IZV5 341 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 DENND6BQ8NEG7 585 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ZFAND1Q8TCF1 268 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ASB15Q8WXK1 588 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 IGSF8Q969P0 613 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 CEP19Q96LK0 163 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 DHRS9Q9BPW9 319 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 TTPALQ9BTX7 342 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 NTMT1Q9BV86 223 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 FARSBQ9NSD9 589 aaKnown RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF226Q9NYT6 803 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 MEIS3P2A8K0S8 358 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 NPIPB8E9PQR5 432 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 H7C0S8 307 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 SNAI1O95863 264 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 EBLN1P0CF75 366 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 PRPS2P11908 318 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ACPPP15309 386 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GPX2P18283 190 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 PTGER3P43115 390 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 MAPKAPK2P49137 400 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 HYAL2Q12891 473 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ABRQ12979 859 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 MTAPQ13126 283 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 WDR45BQ5MNZ6 344 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 CCNJQ5T5M9 372 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 SYCE2Q6PIF2 218 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 DOK6Q6PKX4 331 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 FAM9CQ8IZT9 166 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 OR8H2Q8N162 312 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 SPERTQ8NA61 448 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 OR6J1Q8NGC5 347 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 OR10T2Q8NGX3 314 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 TRNT1Q96Q11 434 aaKnown RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GPR83Q9NYM4 423 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ZMYM5Q9UJ78 669 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms