RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ARL6IP5O75915 188 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NDST3O95803 873 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 H2AFB2P0C5Z0 115 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 AOC1P19801 751 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ADRA1BP35368 520 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CRISP3P54108 245 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 HERVK_113P63132 956 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PDZD9Q8IXQ8 264 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PYROXD2Q8N2H3 581 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 GEMIN6Q8WXD5 167 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 HIST1H2AAQ96QV6 131 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ADAM2Q99965 735 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SLC35A5Q9BS91 424 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ERVK-6Q9BXR3 956 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 DNAJC27Q9NZQ0 273 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ACTR3BQ9P1U1 418 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 HTR3EA5X5Y0 456 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PRORSD1PA6NEY8 169 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 E2F3O00716 465 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 TLX2O43763 284 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 LGALS2P05162 132 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NUDT7P0C024 238 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NR4A2P43354 598 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 DGKZQ13574 1117 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 DSG2Q14126 1118 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 LAPTM4AQ15012 233 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CAMSAP1Q5T5Y3 1602 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CRTC1Q6UUV9 634 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PNLDC1Q8NA58 520 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 TRUB1Q8WWH5 349 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA9Q9BWV2 254 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 MS4A12Q9NXJ0 267 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 MYPNQ86TC9 1320 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SCAMP1O15126 338 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 XYLBO75191 536 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 IMPDH1P20839 514 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 TAS2R39P59534 338 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CNTN2Q02246 1040 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 C7orf61Q8IZ16 206 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NRSN1Q8IZ57 195 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 LNX2Q8N448 690 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PMEPA1Q969W9 287 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SSX3Q99909 188 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 YIPF4Q9BSR8 244 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 FAM83DQ9H4H8 585 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SLA2Q9H6Q3 261 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 MKKSQ9NPJ1 570 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 OR2S2Q9NQN1 319 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ERVK13-1Q9NX77 482 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ITSN1Q15811 1721 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CACNB4O00305 520 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 H1F0P07305 194 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 F7P08709 466 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 EVI2BP34910 448 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ODF4Q2M2E3 257 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PIGGQ5H8A4 983 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 KIAA1614Q5VZ46 1190 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 LRRC66Q68CR7 880 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SERPINA9Q86WD7 417 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 COX18Q8N8Q8 333 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CNIH3Q8TBE1 160 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SCP2D1Q9UJQ7 156 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 RNF17Q9BXT8 1623 aaKnown RBP9.57□□□□□ -0.88
COL4A6-201ENST00000334504 E7EQ34 232 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CLIC1O00299 241 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 B4GALT5O43286 388 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SOX14O95416 240 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 DGKQP52824 942 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 CTBP2P56545 445 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NFKB2Q00653 900 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 PARP15Q460N3 678 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ALG10Q5BKT4 473 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 EPGNQ6UW88 154 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 NXPE1Q8N323 547 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 OR5AK3PQ8NH89 298 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 BRSK1Q8TDC3 778 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ABCB8Q9NUT2 735 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 DPP7Q9UHL4 492 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 TULP4Q9NRJ4 1543 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 BORCS7-ASMTA0A0B4J1R7 106 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NEMP2A6NFY4 417 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 OR2AG2A6NM03 316 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MAFO75444 373 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MT-CYBP00156 380 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 GSTM3P21266 225 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SLC13A2Q13183 592 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MAPK14Q16539 360 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FOXR2Q6PJQ5 311 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SAMD12Q8N8I0 201 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 THUMPD1Q9NXG2 353 aaKnown RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 USP31Q70CQ4 1352 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms