RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SLC5A11Q8WWX8 675 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 MRGPRX1Q96LB2 322 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 OR52E6Q96RD3 313 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 EBPLQ9BY08 206 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 BTBD1Q9H0C5 482 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 CCDC177Q9NQR7 707 aaPredicted RBP16.37■□□□□ 0.21
DDX41-201ENST00000330503 ACSL5Q9ULC5 683 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 FZD4Q9ULV1 537 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 SCML1Q9UN30 329 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 C15orf38-AP3S2A0A0A6YYH1 394 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 ARPC2O15144 300 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 PI15O43692 258 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 PEX1O43933 1283 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 KCNH1O95259 989 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 CAPNS1P04632 268 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 ACP5P13686 325 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 GRIA3P42263 894 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 CLCNKAP51800 687 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 CLNS1AP54105 237 aaKnown RBP16.37■□□□□ 0.21
DDX41-201ENST00000330503 RAE1P78406 368 aaKnown RBP16.37■□□□□ 0.21
DDX41-201ENST00000330503 SLBPQ14493 270 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDX41-201ENST00000330503 FXNQ16595 210 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 ARPINQ7Z6K5 226 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 PDSS2Q86YH6 399 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 CHTF18Q8WVB6 975 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 DNASE1L2Q92874 299 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
DDX41-201ENST00000330503 MENTQ9BUN1 341 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 SPNS1Q9H2V7 528 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 SLC25A37Q9NYZ2 338 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 KANSL1LA0AUZ9 987 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 KLHL33A6NCF5 533 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 PRR19A6NJB7 356 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 LATO43561 262 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 NARSO43776 548 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 SH3BGRLO75368 114 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 LRATO95237 230 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 ASGR2P07307 311 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 OR4D2P58180 307 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 MTPNP58546 118 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 RPS13P62277 151 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 USP30Q70CQ3 517 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 LAS2Q8IYD9 372 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 FAM9CQ8IZT9 166 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 RPLP0P6Q8NHW5 317 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 FAM110BQ8TC76 370 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 ASB12Q8WXK4 309 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 TESCQ96BS2 214 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 METTL2AQ96IZ6 378 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 LRGUKQ96M69 825 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 INSM2Q96T92 566 aaPredicted RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 MYOCQ99972 504 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 TIMM29Q9BSF4 260 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 PIF1Q9H611 641 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 SERHLQ9NQF3 203 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 SLC6A13Q9NSD5 602 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 RUVBL1Q9Y265 456 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 TRBV5-3A0A0A0MS03 114 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 AQP12BA6NM10 295 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 B3GALT4O96024 378 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 PCSK2P16519 638 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 HTR1EP28566 365 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 S100A3P33764 101 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 CYP2A13Q16696 494 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 PYCR3Q53H96 274 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 DUS1LQ6P1R4 473 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 LCTLQ6UWM7 567 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 AQP12AQ8IXF9 295 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 CANT1Q8WVQ1 401 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 GFM2Q969S9 779 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 SCARF2Q96GP6 870 aaPredicted RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 EFCAB11Q9BUY7 163 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 C1QTNF7Q9BXJ2 289 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
DDX41-201ENST00000330503 RMI1Q9H9A7 625 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 SUFUQ9UMX1 484 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 NCKAP1Q9Y2A7 1128 aa16.36■□□□□ 0.21
DDX41-201ENST00000330503 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
DDX41-201ENST00000330503 PCM1Q15154 2024 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 STAMBPO95630 424 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 MTHFD1P11586 935 aaKnown RBP16.35■□□□□ 0.21
DDX41-201ENST00000330503 NCK1P16333 377 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 NDUFV2P19404 249 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 MEF2AQ02078 507 aaPredicted RBP16.35■□□□□ 0.21
DDX41-201ENST00000330503 MLF2Q15773 248 aaPredicted RBP16.35■□□□□ 0.21
DDX41-201ENST00000330503 PGS1Q32NB8 556 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 RUNDC3AQ59EK9 446 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 PRAMEF14Q5SWL7 426 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 PRAMEF13Q5VWM6 474 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 TICAM1Q8IUC6 712 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 TMEM126BQ8IUX1 230 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 C1orf52Q8N6N3 182 aaKnown RBP16.35■□□□□ 0.21
DDX41-201ENST00000330503 ZNF740Q8NDX6 193 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 OR8J3Q8NGG0 315 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 LRTOMTQ8WZ04 291 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 ZNF583Q96ND8 569 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 MUC13Q9H3R2 512 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms