RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MYBPC1Q00872 1141 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PRKG2Q13237 762 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 MAD2L1Q13257 205 aaPredicted RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 SUSD1Q6UWL2 747 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 WDR20Q8TBZ3 569 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 HMGB4Q8WW32 186 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 DUS3LQ96G46 650 aaKnown RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 CNBD2Q96M20 576 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 BTBD1Q9H0C5 482 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PCDHAC1Q9H158 963 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 IL1RL2Q9HB29 575 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 TMEM45AQ9NWC5 275 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 EBF1Q9UH73 591 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 WDR37Q9Y2I8 494 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 AP4S1Q9Y587 144 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 SERTM1A2A2V5 107 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 TNFAIP8O95379 198 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 VARSP26640 1264 aaKnown RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 RGS19P49795 217 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 DMPKQ09013 629 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 DYNC1I2Q13409 638 aaKnown RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 LSAMPQ13449 338 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PTGR1Q14914 329 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PYCR3Q53H96 274 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 C6orf52Q5T4I8 152 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLCO4C1Q6ZQN7 724 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 DCUN1D3Q8IWE4 304 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 HLA-CQ95604 372 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 NRTNQ99748 197 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 RMI1Q9H9A7 625 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 VCX3AQ9NNX9 186 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 GPRC5BQ9NZH0 403 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 TMEM181Q9P2C4 612 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 ACSL5Q9ULC5 683 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 SH2B3Q9UQQ2 575 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 CA5BQ9Y2D0 317 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 TDRKHQ9Y2W6 561 aaKnown RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 KLHL33A6NCF5 533 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 CCDC154A6NI56 674 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 H0YJX3 145 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 CACNB4O00305 520 aaPredicted RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 IFRD1O00458 451 aaPredicted RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 KELP23276 732 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 HNF4AP41235 474 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GK3PQ14409 553 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 COQ5Q5HYK3 327 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 PAGE3Q5JUK9 113 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GRHL2Q6ISB3 625 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 LIX1Q8N485 282 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GALNT4Q8N4A0 578 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 OR5K2Q8NHB8 316 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 OSGEPL1Q9H4B0 414 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 KCNK6Q9Y257 313 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 TCRBV3S1A0A5B6 114 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 KANSL1LA0AUZ9 987 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 OR6B1O95007 311 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 CLPTM1O96005 669 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 CASP2P42575 452 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 CATSPEREQ5SY80 951 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GALNT13Q8IUC8 556 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 C2orf73Q8N5S3 287 aaPredicted RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 OR2T34Q8NGX1 318 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 DGCR14Q96DF8 476 aaKnown RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 APIPQ96GX9 242 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GPATCH1Q9BRR8 931 aaKnown RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 TIMM29Q9BSF4 260 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 MRPS26Q9BYN8 205 aaKnown RBP19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 ASIC5Q9NY37 505 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 GPSM3Q9Y4H4 160 aa19.59■□□□□ 0.73
RIPPLY3-201ENST00000329553 H0YIV9 168 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLC35G4P0C7Q5 338 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 PRPH2P23942 346 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 E2F2Q14209 437 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 MLF2Q15773 248 aaPredicted RBP19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 TIGD2Q4W5G0 525 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 USP39Q53GS9 565 aaKnown RBP19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 CACHD1Q5VU97 1274 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 TMPRSS11BQ86T26 416 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 TRIM69Q86WT6 500 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLCO4A1Q96BD0 722 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 CMTM7Q96FZ5 175 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 MTERF1Q99551 399 aaKnown RBP19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 FGF22Q9HCT0 170 aa19.58■□□□□ 0.73
RIPPLY3-201ENST00000329553 TRIOO75962 3097 aa19.58■□□□□ 0.72
RIPPLY3-201ENST00000329553 H0Y8X5 98 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 FXYD1O00168 92 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SCAMP1O15126 338 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 EEDO75530 441 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 CHRNB1P11230 501 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 BCKDHAP12694 445 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 ETS2P15036 469 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 JAK1P23458 1154 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 YBX1P67809 324 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SAMD4BQ5PRF9 694 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 C6orf10Q5SRN2 563 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 DUS1LQ6P1R4 473 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 LRRC58Q96CX6 371 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 BMFQ96LC9 184 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 INSM2Q96T92 566 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 CDX2Q99626 313 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms